KNA51855 (VCV51_030387)

Aliases : VCV51_030387

Description : penicillin-binding protein 1B [Ensembl]. Bifunctional transglycosylase second domain, Penicillin binding protein transpeptidase domain [Interproscan].

Gene families : OG_02_0000069 (OrthoFinder) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KNA51855
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
AAL00626	spr1823, pbp2a	Penicillin-binding protein 2a [Ensembl]....	0.04	OrthoFinder
AAL00711	spr1909, pbp1b	Penicillin-binding protein 1b [Ensembl]....	0.03	OrthoFinder
AAL19154	STM0190, mrcB	transpeptidase of penicillin-binding protein 1b...	0.06	OrthoFinder
AAL22355	STM3493, mrcA	transpeptidase of penicillin-binding protein 1a...	0.03	OrthoFinder
AEA94137	pbp1B, OG1RF_11450	penicillin-binding protein 1B [Ensembl]....	0.04	OrthoFinder
AKI50227	L2625_02394	penicillin-binding protein [Ensembl]. Glycosyl...	0.05	OrthoFinder
CRO57469	mrcA	Penicillin-binding protein 1A [Ensembl]....	0.01	OrthoFinder
CRP24530	pbpG_2	Penicillin-binding protein 2D [Ensembl]....	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008144	drug binding	None	Extended
MF	GO:0008658	penicillin binding	IEA	Interproscan
MF	GO:0031406	carboxylic acid binding	None	Extended
MF	GO:0033218	amide binding	None	Extended
MF	GO:0033293	monocarboxylic acid binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043177	organic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
MF	GO:1901681	sulfur compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000270	peptidoglycan metabolic process	IEP	Enrichment
BP	GO:0000902	cell morphogenesis	IEP	Enrichment
BP	GO:0006027	glycosaminoglycan catabolic process	IEP	Enrichment
BP	GO:0009253	peptidoglycan catabolic process	IEP	Enrichment
BP	GO:0009653	anatomical structure morphogenesis	IEP	Enrichment
MF	GO:0016874	ligase activity	IEP	Enrichment
CC	GO:0019867	outer membrane	IEP	Enrichment
BP	GO:0030203	glycosaminoglycan metabolic process	IEP	Enrichment
BP	GO:0032502	developmental process	IEP	Enrichment
BP	GO:0051302	regulation of cell division	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001264	Glyco_trans_51	176	347
IPR028166	UB2H	80	164
IPR001460	PCN-bd_Tpept	439	677

External Links

No external refs found!

KNA51855 (VCV51_030387)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation