KNA51855 (VCV51_030387)

Aliases : VCV51_030387

Description : penicillin-binding protein 1B [Ensembl]. Bifunctional transglycosylase second domain, Penicillin binding protein transpeptidase domain [Interproscan].

Gene families : OG_02_0000069 (OrthoFinder) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: KNA51855
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAL00626 spr1823, pbp2a Penicillin-binding protein 2a [Ensembl].... 0.04 OrthoFinder
AAL00711 spr1909, pbp1b Penicillin-binding protein 1b [Ensembl].... 0.03 OrthoFinder
AAL19154 STM0190, mrcB transpeptidase of penicillin-binding protein 1b... 0.06 OrthoFinder
AAL22355 STM3493, mrcA transpeptidase of penicillin-binding protein 1a... 0.03 OrthoFinder
AEA94137 pbp1B, OG1RF_11450 penicillin-binding protein 1B [Ensembl].... 0.04 OrthoFinder
AKI50227 L2625_02394 penicillin-binding protein [Ensembl]. Glycosyl... 0.05 OrthoFinder
CRO57469 mrcA Penicillin-binding protein 1A [Ensembl].... 0.01 OrthoFinder
CRP24530 pbpG_2 Penicillin-binding protein 2D [Ensembl].... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008658 penicillin binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
BP GO:0000902 cell morphogenesis IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
BP GO:0009653 anatomical structure morphogenesis IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
BP GO:0051302 regulation of cell division IEP Enrichment
InterPro domains Description Start Stop
IPR001264 Glyco_trans_51 176 347
IPR028166 UB2H 80 164
IPR001460 PCN-bd_Tpept 439 677
No external refs found!