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  5. KNA52216

KNA52216 (VCV51_033474)


Aliases : VCV51_033474

Description : ribosomal protein L20 [Ensembl]. Ribosomal protein L20 [Interproscan].


Gene families : OG_02_0000432 (OrthoFinder) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA52216
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAL20261 STM1336, rplT 50S ribosomal subunit protein L20 [Ensembl]. Ribosomal... 0.07 OrthoFinder
ADK87005 rplT, MPNE_0135 ribosomal protein L20 [Ensembl]. Ribosomal protein L20... 0.03 OrthoFinder
AEA93330 rplT, OG1RF_10643 50S ribosomal protein L20 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
AHY39505 rplT, CJ8421_01210 50S ribosomal protein L20 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
AKI49777 rplT, L2625_01922 ribosomal protein L20 [Ensembl]. Ribosomal protein L20... 0.05 OrthoFinder
CCG26517 No alias LSU ribosomal protein L20p [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
CPC85832 rplT, ERS093114_01500 50S ribosomal protein L20 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
CRO66872 rplT 50S ribosomal protein L20 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR005813 Ribosomal_L20 3 108
No external refs found!