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  5. KNA53749

KNA53749 (VCV51_030005)


Aliases : VCV51_030005

Description : DNA gyrase subunit B [Ensembl]. Toprim domain, Histidine kinase-, DNA gyrase B subunit insert domain [Interproscan].


Gene families : OG_02_0000123 (OrthoFinder) Phylogenetic Tree(s): OG0000123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA53749
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAC76066 parE, b3030 DNA topoisomerase IV, subunit B [Ensembl]. Toprim... 0.07 OrthoFinder
AAL22055 STM3181, parE DNA topoisomerase IV, subunit B [Ensembl]. Toprim... 0.04 OrthoFinder
AAL22694 STM3835, gyrB DNA gyrase, subunit B [Ensembl]. Toprim domain,... 0.1 OrthoFinder
AAT48201 gyrB, b3699 DNA gyrase, subunit B [Ensembl]. Toprim domain,... 0.06 OrthoFinder
AGT21871 N559_0038 DNA gyrase subunit B [Ensembl]. DNA gyrase B subunit... 0.06 OrthoFinder
AGT22529 N559_0736 DNA topoisomerase IV subunit B [Ensembl]. Toprim domain,... 0.05 OrthoFinder
AKP14396 parE, WX61_00313 DNA topoisomerase 4 subunit B [Ensembl]. Toprim domain,... 0.04 OrthoFinder
AKP15193 gyrB, WX61_01144 DNA gyrase subunit B [Ensembl]. Toprim domain, Histidine... 0.03 OrthoFinder
CRO55054 parE DNA topoisomerase 4 subunit B [Ensembl]. Toprim domain,... 0.06 OrthoFinder
CRP69988 gyrB DNA gyrase subunit B [Ensembl]. Toprim domain, Histidine... 0.05 OrthoFinder
EDJ89973 CGSHi22421_07703 DNA topoisomerase IV subunit B [Ensembl]. Toprim domain,... 0.04 OrthoFinder
EDJ90160 gyrB, CGSHi22421_06007 DNA gyrase subunit B [Ensembl]. DNA gyrase B, Histidine... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006265 DNA topological change IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002288 DNA_gyrase_B_C 733 794
IPR041423 GyrB_insert 565 730
IPR013506 Topo_IIA_bsu_dom2 221 391
IPR006171 TOPRIM_domain 420 532
IPR003594 HATPase_C 32 172
No external refs found!