1. Home
  2. Species
  3. Vibrio cholerae
  4. Sequence
  5. KNA54694

KNA54694 (VCV51_030778)


Aliases : VCV51_030778

Description : ATPase [Ensembl]. AAA C-terminal domain, MgsA AAA+ ATPase C terminal, ATPase family associated with various cellular activities (AAA) [Interproscan].


Gene families : OG_02_0000427 (OrthoFinder) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA54694
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73978 rarA, b0892 recombination intermediate processing DNA-dependent... 0.07 OrthoFinder
AAL19897 STM0962, ycaJ putative polynucleotide enzyme [Ensembl]. AAA C-terminal... 0.08 OrthoFinder
AGT25011 N559_3355, RarA recombination factor protein RarA [Ensembl]. AAA... 0.02 OrthoFinder
AKI49511 L2625_01615 ATPase family protein [Ensembl]. AAA C-terminal domain,... 0.03 OrthoFinder
CCL17442 BN171_1500018 Putative replication-associated recombination protein A... 0.05 OrthoFinder
CRP39895 rarA Replication-associated recombination protein A... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005539 glycosaminoglycan binding IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
BP GO:0009271 phage shock IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0009615 response to virus IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0042834 peptidoglycan binding IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0043213 bacteriocin transport IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0098586 cellular response to virus IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR032423 AAA_assoc_2 172 248
IPR021886 MgsA_C 249 415
IPR003959 ATPase_AAA_core 34 139
No external refs found!