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Aliases : VCV51_031688
Description : RNA pseudouridylate synthase [Ensembl]. RNA pseudouridylate synthase [Interproscan].
Gene families : OG_02_0000046 (OrthoFinder) Phylogenetic Tree(s): OG0000046_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: KNA54831 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAL20116 | STM1187, rluC | 23S rRNA pseudouridylate synthase [Ensembl]. S4 domain,... | 0.06 | OrthoFinder | |
| AGT24864 | N559_3204 | 23S rRNA pseudouridylate synthase C [Ensembl]. S4 domain... | 0.06 | OrthoFinder | |
| CCG26588 | No alias | Ribosomal large subunit pseudouridine synthase D... | 0.04 | OrthoFinder | |
| EDJ90258 | metN, CGSHi22421_06444 | DL-methionine transporter ATP-binding subunit [Ensembl].... | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0009982 | pseudouridine synthase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Enrichment |
| MF | GO:0004810 | tRNA adenylyltransferase activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| MF | GO:1990817 | RNA adenylyltransferase activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006145 | PsdUridine_synth_RsuA/RluA | 22 | 168 |
| No external refs found! |