Aliases : VCV51_033155
Description : 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3 [Interproscan].
Gene families : OG_02_0000401 (OrthoFinder) Phylogenetic Tree(s): OG0000401_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: KNA54972 | |
Cluster | HCCA: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC76345 | rplC, b3320 | 50S ribosomal subunit protein L3 [Ensembl]. Ribosomal... | 0.41 | OrthoFinder | |
AAK98992 | spr0188, rplC | 50S Ribosomal protein L3 [Ensembl]. Ribosomal protein L3... | 0.24 | OrthoFinder | |
AAL22303 | STM3440, rplC | 50S ribosomal subunit protein L3 [Ensembl]. Ribosomal... | 0.4 | OrthoFinder | |
ADK86699 | rplC, MPNE_0194 | 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3... | 0.19 | OrthoFinder | |
AEA92838 | rplC, OG1RF_10151 | 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3... | 0.23 | OrthoFinder | |
AGT22244 | N559_0434 | 50S ribosomal protein L3 [Ensembl]. | 0.24 | OrthoFinder | |
AHY40892 | rplC, CJ8421_08600 | 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3... | 0.25 | OrthoFinder | |
AKI50567 | rplC, L2625_02777 | ribosomal protein L3 [Ensembl]. Ribosomal protein L3... | 0.17 | OrthoFinder | |
AKP15123 | rplC, WX61_01069 | 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3... | 0.05 | OrthoFinder | |
CBI65717 | rplC, HPB8_160 | large subunit ribosomal protein L3 [Ensembl]. Ribosomal... | 0.12 | OrthoFinder | |
CCG27379 | No alias | LSU ribosomal protein L3p (L3e) [Ensembl]. Ribosomal... | 0.12 | OrthoFinder | |
CCL20563 | rplC, BN171_70003 | 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3... | 0.24 | OrthoFinder | |
CCP43445 | rplC, Rv0701 | 50S ribosomal protein L3 RplC [Ensembl]. Ribosomal... | 0.12 | OrthoFinder | |
CPD13496 | rplC, ERS093114_02122 | 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3... | 0.25 | OrthoFinder | |
CRO73740 | rplC | 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3... | 0.23 | OrthoFinder | |
EDJ91354 | CGSHi22421_04603 | acetyl-CoA:acetoacetyl-CoA transferase subunit alpha... | 0.25 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Enrichment |
MF | GO:0004810 | tRNA adenylyltransferase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005525 | GTP binding | IEP | Enrichment |
CC | GO:0005840 | ribosome | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006414 | translational elongation | IEP | Enrichment |
BP | GO:0006438 | valyl-tRNA aminoacylation | IEP | Enrichment |
MF | GO:0008097 | 5S rRNA binding | IEP | Enrichment |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
BP | GO:0031554 | regulation of DNA-templated transcription, termination | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
BP | GO:0051128 | regulation of cellular component organization | IEP | Enrichment |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
MF | GO:1990817 | RNA adenylyltransferase activity | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000597 | Ribosomal_L3 | 67 | 182 |
No external refs found! |