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  5. KNA54980

KNA54980 (VCV51_033163)


Aliases : VCV51_033163

Description : ribosomal L29 protein [Ensembl]. Ribosomal L29 protein [Interproscan].


Gene families : OG_02_0000484 (OrthoFinder) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA54980
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC76337 rpmC, b3312 50S ribosomal subunit protein L29 [Ensembl]. Ribosomal... 0.35 OrthoFinder
AAK99001 spr0197, rpmC 50S Ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.25 OrthoFinder
AAL22295 STM3432, rpmC 50S ribosomal subunit protein L29 [Ensembl]. Ribosomal... 0.33 OrthoFinder
AEA92846 rpmC, OG1RF_10159 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.11 OrthoFinder
AGT22250 N559_0442 50S ribosomal protein L29 [Ensembl]. 0.1 OrthoFinder
AHY40884 CJ8421_08560 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.19 OrthoFinder
AKI50559 rpmC, L2625_02769 ribosomal protein L29 [Ensembl]. Ribosomal protein... 0.14 OrthoFinder
AKP15131 rpmC, WX61_01077 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.12 OrthoFinder
CBI65725 rpmC, HPB8_168 large subunit ribosomal protein L2 [Ensembl]. Ribosomal... 0.03 OrthoFinder
CCG27387 No alias LSU ribosomal protein L29p (L35e) [Ensembl]. Ribosomal... 0.21 OrthoFinder
CCL20571 rpmC, BN171_70011 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.22 OrthoFinder
CCP43453 rpmC, Rv0709 50S ribosomal protein L29 RpmC [Ensembl]. Ribosomal L29... 0.12 OrthoFinder
CPD13781 rpmC, ERS093114_02130 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.3 OrthoFinder
CRO73990 rpmC 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.29 OrthoFinder
EDJ91362 CGSHi22421_04643 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... 0.39 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0015804 neutral amino acid transport IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0031554 regulation of DNA-templated transcription, termination IEP Enrichment
BP GO:0032328 alanine transport IEP Enrichment
MF GO:0033856 pyridoxine 5'-phosphate synthase activity IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 4 60
No external refs found!