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  5. KNA54998

KNA54998 (VCV51_033181)


Aliases : VCV51_033181

Description : ribosomal protein L17 [Ensembl]. Ribosomal protein L17 [Interproscan].


Gene families : OG_02_0000479 (OrthoFinder) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA54998
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC76319 rplQ, b3294 50S ribosomal subunit protein L17 [Ensembl]. Ribosomal... 0.24 OrthoFinder
AAK99020 spr0216, rplQ 50S Ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.21 OrthoFinder
AAL22277 STM3414, rplQ 50S ribosomal subunit protein L17 [Ensembl]. Ribosomal... 0.32 OrthoFinder
AEA92865 rplQ, OG1RF_10178 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.18 OrthoFinder
AGT22266 N559_0458 50S ribosomal protein L17 [Ensembl]. 0.08 OrthoFinder
AHY40769 rplQ, CJ8421_07985 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.14 OrthoFinder
AKI50540 rplQ, L2625_02750 ribosomal protein L17 [Ensembl]. Ribosomal protein L17... 0.18 OrthoFinder
AKP15147 rplQ, WX61_01093 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
CBI65744 rplQ, HPB8_187 large subunit ribosomal protein L17 [Ensembl]. Ribosomal... 0.1 OrthoFinder
CCG27406 No alias LSU ribosomal protein L17p [Ensembl]. Ribosomal protein... 0.16 OrthoFinder
CCL20592 rplQ, BN171_70032 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.15 OrthoFinder
CCP46278 rplQ, Rv3456c 50S ribosomal protein L17 RplQ [Ensembl]. Ribosomal... 0.16 OrthoFinder
CPD14418 rplQ, ERS093114_02149 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.18 OrthoFinder
CRO74536 rplQ 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.19 OrthoFinder
EDJ91382 CGSHi22421_04743 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.22 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0008616 queuosine biosynthetic process IEP Enrichment
BP GO:0009163 nucleoside biosynthetic process IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0031554 regulation of DNA-templated transcription, termination IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042455 ribonucleoside biosynthetic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043094 cellular metabolic compound salvage IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
BP GO:0043174 nucleoside salvage IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046116 queuosine metabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901659 glycosyl compound biosynthetic process IEP Enrichment
BP GO:1990397 queuosine salvage IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000456 Ribosomal_L17 20 116
No external refs found!