KNA55086 (VCV51_031847)

Aliases : VCV51_031847

Description : nitrogen regulation protein NR(I) [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].

Gene families : OG_02_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: KNA55086
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AAC74385 pspF, b1303 psp operon transcriptional activator [Ensembl]. Sigma-54... 0.05 OrthoFinder
AAC75280 atoC, b2220 fused response regulator of ato operon, in two-component... 0.04 OrthoFinder
AAC75607 glrR, b2554 response regulator regulating glmY sRNA in two-component... 0.05 OrthoFinder
AAC76865 glnG, b3868 fused DNA-binding response regulator in two-component... 0.05 OrthoFinder
AAC76978 zraR, b4004 fused DNA-binding response regulator in two-component... 0.04 OrthoFinder
AAL19321 STM0367, prpR regulator for prp operon (EBP family) [Ensembl].... 0.04 OrthoFinder
AAL21456 STM2562, yfhA putative transcriptional regulator of two-component... 0.04 OrthoFinder
AGT22853 N559_1079 sigma-54 dependent transcriptional regulator [Ensembl].... 0.03 OrthoFinder
AGT22959 N559_1193 anaerobic nitric oxide reductase transcription regulator... 0.02 OrthoFinder
AGT23137 N559_1375 putative 2-component transcriptional regulator... 0.02 OrthoFinder
AGT26495 N559_4911 fused DNA-binding response regulator [Ensembl]. Response... 0.03 OrthoFinder
AGT26682 N559_5106 nitrogen regulation protein NR(I) [Ensembl]. Sigma-54... 0.05 OrthoFinder
AKI50171 L2625_02335 sigma-54 dependent transcriptional regulator [Ensembl].... 0.03 OrthoFinder
AKP15503 zraR, WX61_01457 Transcriptional regulatory protein ZraR [Ensembl].... 0.02 OrthoFinder
CCL17955 BN171_1970024 Two-component response regulator [Ensembl]. Response... 0.02 OrthoFinder
CCL18448 BN171_2340008 Transcriptional regulator, sigma-54-dependent [Ensembl].... 0.07 OrthoFinder
CCL19358 BN171_3080005 Transcriptional regulator, sigma-54-dependent [Ensembl].... 0.04 OrthoFinder
CCL19713 BN171_3410005 Putative sigma-54 interacting protein (fragment)... 0.04 OrthoFinder
CCL19910 BN171_360004 Transcriptional regulator, sigma-54-dependent [Ensembl].... 0.04 OrthoFinder
CRN65608 qseF Quorum-sensing regulator protein F [Ensembl]. Sigma-54... 0.04 OrthoFinder
CRP62097 rocR Arginine utilization regulatory protein RocR [Ensembl].... 0.03 OrthoFinder
CRP79684 zraR_6 Transcriptional regulatory protein ZraR [Ensembl].... 0.06 OrthoFinder
KNA59396 VCV51_031296 sigma-54 interaction domain-containing protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0008134 transcription factor binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP Enrichment
CC GO:0015627 type II protein secretion system complex IEP Enrichment
InterPro domains Description Start Stop
IPR002197 HTH_Fis 425 465
IPR002078 Sigma_54_int 141 308
IPR001789 Sig_transdc_resp-reg_receiver 6 115
No external refs found!