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  5. KNA55994

KNA55994 (VCV51_030912)


Aliases : VCV51_030912

Description : AraC family Bacterial regulatory helix-turn-helix protein [Ensembl]. Helix-turn-helix domain [Interproscan].


Gene families : OG_02_0002151 (OrthoFinder) Phylogenetic Tree(s): OG0002151_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA55994
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AKI50787 L2625_03004 transcriptional regulator, AraC family [Ensembl].... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0015804 neutral amino acid transport IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032328 alanine transport IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR018060 HTH_AraC 214 293
No external refs found!