KNA56389 (VCV51_030673)


Aliases : VCV51_030673

Description : penicillin-binding protein 2 [Ensembl]. Penicillin-binding Protein dimerisation domain, Penicillin binding protein transpeptidase domain [Interproscan].


Gene families : OG_02_0000286 (OrthoFinder) Phylogenetic Tree(s): OG0000286_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA56389
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73736 mrdA, b0635 penicillin-binding protein 2, transpeptidase involved in... 0.07 OrthoFinder
AAL00321 spr1517, pbp2b Penicillin-binding protein 2B [Ensembl].... 0.03 OrthoFinder
AAL19591 STM0640, mrdA cell elongation specific transpeptidase of... 0.07 OrthoFinder
AGT25297 N559_3655 penicillin-binding protein 2 [Ensembl].... 0.05 OrthoFinder
EDJ91251 CGSHi22421_01994 penicillin-binding protein 2 [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008658 penicillin binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009271 phage shock IEP Enrichment
CC GO:0009360 DNA polymerase III complex IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0009615 response to virus IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0043213 bacteriocin transport IEP Enrichment
MF GO:0045301 tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0070206 protein trimerization IEP Enrichment
BP GO:0071709 membrane assembly IEP Enrichment
BP GO:0098586 cellular response to virus IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR005311 PBP_dimer 65 240
IPR001460 PCN-bd_Tpept 272 616
No external refs found!