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  5. KNA56390

KNA56390 (VCV51_032950)


Aliases : VCV51_032950

Description : hypothetical protein [Ensembl]. Predicted SPOUT methyltransferase [Interproscan].


Gene families : OG_02_0000766 (OrthoFinder) Phylogenetic Tree(s): OG0000766_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA56390
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73737 rlmH, b0636 23S rRNA m(3)Psi1915 pseudouridine methyltransferase,... 0.06 OrthoFinder
AAL19592 STM0641, ybeA putative cytoplasmic protein [Ensembl]. Predicted SPOUT... 0.03 OrthoFinder
AGT25296 N559_3654 rRNA large subunit methyltransferase [Ensembl]. 0.07 OrthoFinder
AKP15227 rlmH, WX61_01178 Ribosomal RNA large subunit methyltransferase H... 0.04 OrthoFinder
EDJ91250 CGSHi22421_01989 hypothetical protein [Ensembl]. Predicted SPOUT... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
CC GO:0009317 acetyl-CoA carboxylase complex IEP Enrichment
CC GO:0009360 DNA polymerase III complex IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
BP GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0070206 protein trimerization IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0071709 membrane assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003742 RlmH-like 2 143
No external refs found!