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  5. KNA59434

KNA59434 (VCV51_031277)


Aliases : VCV51_031277

Description : LolC/E family lipoprotein releasing system [Ensembl]. FtsX-like permease family, MacB-like periplasmic core domain [Interproscan].


Gene families : OG_02_0000459 (OrthoFinder) Phylogenetic Tree(s): OG0000459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA59434
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC74200 lolC, b1116 lipoprotein-releasing system transmembrane protein... 0.05 OrthoFinder
AAC74202 lolE, b1118 lipoprotein-releasing system transmembrane protein... 0.03 OrthoFinder
AAL20146 STM1217, ycfU integral membrane protein ABC transporter [Ensembl].... 0.06 OrthoFinder
AAL20148 STM1219, ycfW integral membrane protein ABC transporter [Ensembl].... 0.04 OrthoFinder
AGT24832 N559_3172, LolE outer membrane-specific lipoprotein transporter subunit... 0.04 OrthoFinder
AHY40154 CJ8421_04655 putative permease [Ensembl]. FtsX-like permease family... 0.04 OrthoFinder
AKP16175 lolE, WX61_02151 Lipoprotein-releasing system transmembrane protein LolE... 0.03 OrthoFinder
EDJ90129 CGSHi22421_03378 ABC-type transport system, involved in lipoprotein... 0.06 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004529 exodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0005539 glycosaminoglycan binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
MF GO:0008852 exodeoxyribonuclease I activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009653 anatomical structure morphogenesis IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0042834 peptidoglycan binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0051302 regulation of cell division IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0070206 protein trimerization IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR025857 MacB_PCD 33 212
IPR003838 ABC3_permease_dom 300 399
No external refs found!