Aliases : VCV51_032317
Description : AraC-like ligand binding domain-containing protein [Ensembl]. Helix-turn-helix domain, AraC-like ligand binding domain [Interproscan].
Gene families : OG_02_0001256 (OrthoFinder) Phylogenetic Tree(s): OG0001256_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: KNA59906 | |
Cluster | HCCA: Cluster_30 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AGT24818 | N559_3158 | AraC family transcriptional regulator [Ensembl].... | 0.03 | OrthoFinder | |
AGT26284 | N559_4692 | putative helix-turn-helix, AraC type [Ensembl].... | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
BP | GO:0006568 | tryptophan metabolic process | IEP | Enrichment |
BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Enrichment |
BP | GO:0006586 | indolalkylamine metabolic process | IEP | Enrichment |
BP | GO:0009308 | amine metabolic process | IEP | Enrichment |
BP | GO:0042430 | indole-containing compound metabolic process | IEP | Enrichment |
BP | GO:0044106 | cellular amine metabolic process | IEP | Enrichment |
No external refs found! |