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  5. KNA59916

KNA59916 (VCV51_032327, VcmN)


Aliases : VCV51_032327, VcmN

Description : multidrug efflux pump VcmN [Ensembl]. MatE [Interproscan].


Gene families : OG_02_0000158 (OrthoFinder) Phylogenetic Tree(s): OG0000158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA59916
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AEA93078 OG1RF_10391 MATE efflux family protein [Ensembl]. MatE [Interproscan]. 0.03 OrthoFinder
AHY39799 CJ8421_02740 MATE efflux family protein [Ensembl]. MatE [Interproscan]. 0.03 OrthoFinder
AKI50082 L2625_02240 MATE efflux family protein [Ensembl]. Multi... 0.03 OrthoFinder
CCL19826 BN171_3520012 Putative drug/sodium antiporter, MATE family [Ensembl].... 0.02 OrthoFinder
CCL20604 BN171_710002 Putative drug/sodium antiporter, MATE family [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Enrichment
MF GO:0005539 glycosaminoglycan binding IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0034258 nicotinamide riboside transport IEP Enrichment
MF GO:0042834 peptidoglycan binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002528 MATE_fam 18 178
IPR002528 MATE_fam 237 390
No external refs found!