Aliases : OG1RF_10991
Description : spermidine/putrescine ABC superfamily ATP binding cassette transporter, permease protein [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].
Gene families : OG_02_0000276 (OrthoFinder) Phylogenetic Tree(s): OG0000276_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AEA93678 | |
Cluster | HCCA: Cluster_15 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC73944 | potI, b0857 | putrescine ABC transporter permease [Ensembl].... | 0.02 | OrthoFinder | |
AAL19816 | STM0880, potI | putrescine transporter [Ensembl].... | 0.04 | OrthoFinder | |
CRO92466 | ydcV_3 | Inner membrane ABC transporter permease protein YdcV... | 0.02 | OrthoFinder | |
CRO93042 | ydcV_4 | Inner membrane ABC transporter permease protein YdcV... | 0.02 | OrthoFinder | |
KNA57822 | VCV51_032791 | binding-protein-dependent transport system inner... | 0.05 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016020 | membrane | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Enrichment |
MF | GO:0003824 | catalytic activity | IEP | Enrichment |
MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Enrichment |
MF | GO:0004019 | adenylosuccinate synthase activity | IEP | Enrichment |
MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
MF | GO:0004637 | phosphoribosylamine-glycine ligase activity | IEP | Enrichment |
MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Enrichment |
BP | GO:0006144 | purine nucleobase metabolic process | IEP | Enrichment |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0006534 | cysteine metabolic process | IEP | Enrichment |
BP | GO:0006790 | sulfur compound metabolic process | IEP | Enrichment |
MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
MF | GO:0008962 | phosphatidylglycerophosphatase activity | IEP | Enrichment |
BP | GO:0009069 | serine family amino acid metabolic process | IEP | Enrichment |
BP | GO:0009092 | homoserine metabolic process | IEP | Enrichment |
BP | GO:0009113 | purine nucleobase biosynthetic process | IEP | Enrichment |
BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Enrichment |
MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Enrichment |
MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
MF | GO:0016791 | phosphatase activity | IEP | Enrichment |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Enrichment |
MF | GO:0016832 | aldehyde-lyase activity | IEP | Enrichment |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Enrichment |
MF | GO:0019238 | cyclohydrolase activity | IEP | Enrichment |
BP | GO:0019346 | transsulfuration | IEP | Enrichment |
BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Enrichment |
BP | GO:0042440 | pigment metabolic process | IEP | Enrichment |
BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
BP | GO:0046148 | pigment biosynthetic process | IEP | Enrichment |
BP | GO:0050667 | homocysteine metabolic process | IEP | Enrichment |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Enrichment |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000515 | MetI-like | 79 | 246 |
No external refs found! |