AEA93917 (sacT, OG1RF_11230)

Aliases : sacT, OG1RF_11230

Description : SacPA operon antiterminator [Ensembl]. PRD domain, CAT RNA binding domain [Interproscan].

Gene families : OG_02_0000403 (OrthoFinder) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AEA93917
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method	Actions
CCL19572	bglG, BN171_3270010	Transcription antiterminator, PTS operon regulator...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0005215	transporter activity	IEP	Enrichment
BP	GO:0006304	DNA modification	IEP	Enrichment
BP	GO:0006305	DNA alkylation	IEP	Enrichment
BP	GO:0006306	DNA methylation	IEP	Enrichment
BP	GO:0006414	translational elongation	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
MF	GO:0008170	N-methyltransferase activity	IEP	Enrichment
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Enrichment
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
MF	GO:0022804	active transmembrane transporter activity	IEP	Enrichment
MF	GO:0022857	transmembrane transporter activity	IEP	Enrichment
BP	GO:0032259	methylation	IEP	Enrichment
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Enrichment
BP	GO:0043414	macromolecule methylation	IEP	Enrichment
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Enrichment
BP	GO:0044728	DNA methylation or demethylation	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011608	PRD	180	272
IPR011608	PRD	73	161
IPR004341	CAT_RNA-bd_dom	1	52

External Links

No external refs found!