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AEA94267 (ysxC, OG1RF_11580)


Aliases : ysxC, OG1RF_11580

Description : ribosome biogenesis GTP-binding protein YsxC [Ensembl]. 50S ribosome-binding GTPase [Interproscan].


Gene families : OG_02_0000622 (OrthoFinder) Phylogenetic Tree(s): OG0000622_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AEA94267
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AKI49555 L2625_01663 GTPase/GTP-binding protein [Ensembl]. GTP binding domain... 0.04 OrthoFinder
CBI67207 yihA, HPB8_1650 GTP-binding protein [Ensembl]. 50S ribosome-binding... 0.02 OrthoFinder
CCG26986 EngB GTP-binding protein EngB [Ensembl]. 50S ribosome-binding... 0.04 OrthoFinder
CPC85594 engB, ERS093114_01495 GTP-binding protein EngB [Ensembl]. 50S ribosome-binding... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0005518 collagen binding IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 25 143
No external refs found!