Aliases : sufD, OG1RF_11828
Description : iron-sulfur ABC superfamily ATP binding cassette transporter, membrane protein [Ensembl]. Uncharacterized protein family (UPF0051) [Interproscan].
Gene families : OG_02_0000592 (OrthoFinder) Phylogenetic Tree(s): OG0000592_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AEA94515 | |
Cluster | HCCA: Cluster_26 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAK99576 | spr0772 | Conserved hypothetical protein [Ensembl].... | 0.06 | OrthoFinder | |
AAK99579 | spr0775 | Conserved hypothetical protein [Ensembl].... | 0.05 | OrthoFinder | |
AAL20294 | STM1370, sufB | putative ABC transporter [Ensembl]. Uncharacterized... | 0.04 | OrthoFinder | |
AKI50339 | sufB, L2625_02526 | FeS assembly protein [Ensembl]. SUF system FeS cluster... | 0.03 | OrthoFinder | |
AKI50342 | sufD, L2625_02529 | FeS assembly protein [Ensembl]. SUF system FeS cluster... | 0.04 | OrthoFinder | |
CCL20076 | BN171_3690020 | Putative iron-sulfur assembly protein [Ensembl].... | 0.02 | OrthoFinder | |
CCP44220 | Rv1461 | Conserved protein [Ensembl]. Uncharacterized protein... | 0.03 | OrthoFinder | |
CCP44221 | Rv1462 | Conserved hypothetical protein [Ensembl].... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0016226 | iron-sulfur cluster assembly | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004347 | glucose-6-phosphate isomerase activity | IEP | Enrichment |
MF | GO:0004476 | mannose-6-phosphate isomerase activity | IEP | Enrichment |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Enrichment |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
MF | GO:0004817 | cysteine-tRNA ligase activity | IEP | Enrichment |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
BP | GO:0006423 | cysteinyl-tRNA aminoacylation | IEP | Enrichment |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Enrichment |
BP | GO:0008643 | carbohydrate transport | IEP | Enrichment |
MF | GO:0008982 | protein-N(PI)-phosphohistidine-sugar phosphotransferase activity | IEP | Enrichment |
BP | GO:0009401 | phosphoenolpyruvate-dependent sugar phosphotransferase system | IEP | Enrichment |
MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Enrichment |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Enrichment |
MF | GO:0016874 | ligase activity | IEP | Enrichment |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
BP | GO:0043038 | amino acid activation | IEP | Enrichment |
BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Enrichment |
MF | GO:0070279 | vitamin B6 binding | IEP | Enrichment |
BP | GO:0071702 | organic substance transport | IEP | Enrichment |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000825 | SUF_FeS_clus_asmbl_SufBD | 176 | 401 |
No external refs found! |