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AEA94681 (rnr, OG1RF_11994)


Aliases : rnr, OG1RF_11994

Description : ribonuclease R [Ensembl]. RNB domain, Cold shock domain, S1 RNA binding domain, Ribonuclease B OB domain [Interproscan].


Gene families : OG_02_0000589 (OrthoFinder) Phylogenetic Tree(s): OG0000589_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AEA94681
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AAK99682 spr0878, rnr Exoribonuclease R [Ensembl]. RNB domain, Cold shock... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004540 ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004140 dephospho-CoA kinase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008998 ribonucleoside-triphosphate reductase activity IEP Enrichment
BP GO:0015936 coenzyme A metabolic process IEP Enrichment
BP GO:0015937 coenzyme A biosynthetic process IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001900 RNase_II/R 260 587
IPR003029 S1_domain 635 716
IPR013223 RNase_B_OB_dom 74 130
IPR040476 CSD2 162 238
No external refs found!