Aliases : truA, CJ8421_04115
Description : tRNA pseudouridine synthase A [Ensembl]. tRNA pseudouridine synthase [Interproscan].
Gene families : OG_02_0000380 (OrthoFinder) Phylogenetic Tree(s): OG0000380_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AHY40050 | |
Cluster | HCCA: Cluster_1 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAL21269 | STM2368, truA | pseudouridylate synthase I [Ensembl]. tRNA pseudouridine... | 0.03 | OrthoFinder | |
AGT23295 | N559_1543 | tRNA pseudouridine synthase A [Ensembl]. alpha/beta... | 0.04 | OrthoFinder | |
AKP15154 | truA, WX61_01100 | tRNA pseudouridine synthase A [Ensembl]. tRNA... | 0.03 | OrthoFinder | |
CBI65967 | truA, HPB8_410 | tRNA pseudouridine synthase A [Ensembl]. tRNA... | 0.04 | OrthoFinder | |
CCG27549 | No alias | tRNA pseudouridine synthase A [Ensembl]. tRNA... | 0.03 | OrthoFinder | |
CCL18026 | truA, BN171_2030012 | Pseudouridylate synthase (tRNA pseudouridine synthase A)... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEA | Interproscan |
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0009451 | RNA modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR020097 | PsdUridine_synth_TruA_a/b_dom | 144 | 240 |
No external refs found! |