AEA95217 (clpC, OG1RF_12530)

Aliases : clpC, OG1RF_12530

Description : ATPase/chaperone ClpC, probable specificity factor for ClpP protease [Ensembl]. C-terminal, AAA lid domain, Clp amino terminal domain, AAA domain (Cdc48 subfamily), ATPase family associated with various cellular activities (AAA) [Interproscan].

Gene families : OG_02_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AEA95217
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AKI48945	clpE, L2625_01027	ATP-dependent Clp protease, ATP-binding subunit...	0.05	OrthoFinder
CPC44266	clpB_1, ERS093114_00454	chaperone protein ClpB [Ensembl]. C-terminal, AAA lid...	0.03	OrthoFinder
CPC57876	clpC, ERS093114_00855	endopeptidase Clp ATP-binding subunit C [Ensembl]....	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004150	dihydroneopterin aldolase activity	IEP	Enrichment
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Enrichment
BP	GO:0009235	cobalamin metabolic process	IEP	Enrichment
BP	GO:0009236	cobalamin biosynthetic process	IEP	Enrichment
MF	GO:0015234	thiamine transmembrane transporter activity	IEP	Enrichment
BP	GO:0015888	thiamine transport	IEP	Enrichment
BP	GO:0019725	cellular homeostasis	IEP	Enrichment
BP	GO:0030001	metal ion transport	IEP	Enrichment
MF	GO:0031072	heat shock protein binding	IEP	Enrichment
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Enrichment
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Enrichment
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Enrichment
BP	GO:0042592	homeostatic process	IEP	Enrichment
BP	GO:0045454	cell redox homeostasis	IEP	Enrichment
BP	GO:0065008	regulation of biological quality	IEP	Enrichment
BP	GO:0072348	sulfur compound transport	IEP	Enrichment
MF	GO:1901474	azole transmembrane transporter activity	IEP	Enrichment
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004176	Clp_R_dom	97	146
IPR004176	Clp_R_dom	16	66
IPR019489	Clp_ATPase_C	724	803
IPR003959	ATPase_AAA_core	546	717
IPR041546	ClpA/ClpB_AAA_lid	354	455
IPR003959	ATPase_AAA_core	215	346

External Links

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AEA95217 (clpC, OG1RF_12530)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation