AEA95241 (srlM, OG1RF_12554)


Aliases : srlM, OG1RF_12554

Description : putative transcriptional activator SrlM [Ensembl]. HTH domain, PRD domain, Phosphoenolpyruvate-dependent sugar phosphotransferase system [Interproscan].


Gene families : OG_02_0000208 (OrthoFinder) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AEA95241
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAK99083 spr0279, bglG Transcription antiterminator BglG family [Ensembl]. HTH... 0.06 OrthoFinder
AKI48268 L2625_00321 transcriptional antiterminator [Ensembl]. Mga... 0.07 OrthoFinder
AKI48362 L2625_00417 transcriptional antiterminator [Ensembl]. PTS EIIA... 0.05 OrthoFinder
AKI48384 L2625_00440 transcriptional antiterminator [Ensembl]. PRD domain,... 0.03 OrthoFinder
AKI48866 L2625_00944 transcriptional antiterminator, BglG family [Ensembl].... 0.04 OrthoFinder
CCG26679 No alias Transcriptional antiterminator of lichenan operon, BglG... 0.05 OrthoFinder
CCL18826 BN171_2670008 Transcription antiterminator, PTS operon regulator... 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006063 uronic acid metabolic process IEP Enrichment
BP GO:0006064 glucuronate catabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008927 mannonate dehydratase activity IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0019585 glucuronate metabolic process IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0046992 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond IEP Enrichment
MF GO:0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051191 prosthetic group biosynthetic process IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Enrichment
InterPro domains Description Start Stop
IPR002178 PTS_EIIA_type-2_dom 493 608
IPR013196 HTH_11 90 147
IPR013196 HTH_11 6 51
IPR011608 PRD 282 369
No external refs found!