1. Home
  2. Species
  3. Campylobacter jejuni
  4. Sequence
  5. AHY40170

AHY40170 (trmE, CJ8421_04735)


Aliases : trmE, CJ8421_04735

Description : tRNA modification GTPase TrmE [Ensembl]. MnmE helical domain, 50S ribosome-binding GTPase, GTP-binding protein TrmE N-terminus [Interproscan].


Gene families : OG_02_0000630 (OrthoFinder) Phylogenetic Tree(s): OG0000630_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AHY40170
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAC76729 mnmE, b3706 tRNA U34 5-methylaminomethyl-2-thiouridine modification... 0.03 OrthoFinder
AKP15252 mnmE, WX61_01203 tRNA modification GTPase MnmE [Ensembl]. MnmE helical... 0.03 OrthoFinder
CBI65641 thdF, HPB8_84 tRNA modification GTPase [Ensembl]. MnmE helical domain,... 0.04 OrthoFinder
CPC69467 mnmE, ERS093114_01080 tRNA (5-carboxymethylaminomethyl-2-thiouridylate)... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR025867 MnmE_helical 127 439
IPR018948 GTP-bd_TrmE_N 4 118
IPR006073 GTP-bd 216 331
No external refs found!