AAC74197 (ldtC, b1113)

Aliases : ldtC, b1113

Description : L,D-transpeptidase linking Lpp to murein [Ensembl]. LysM domain [Interproscan].

Gene families : OG_02_0000888 (OrthoFinder) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAC74197
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AAL20144 STM1215, ycfS putative periplasmic protein [Ensembl]. LysM domain... 0.12 OrthoFinder
AAL20299 STM1375, ynhG putative LysM domain protein [Ensembl]. LysM domain... 0.03 OrthoFinder
CRP22422 ybiS putative L,D-transpeptidase YbiS precursor [Ensembl]. L... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003941 L-serine ammonia-lyase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016841 ammonia-lyase activity IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR018392 LysM_dom 46 90
IPR041597 Ldt_C 243 309
IPR005490 LD_TPept_cat_dom 102 239
UniProtKB P75954