AAC74405 (tyrR, b1323)

Aliases : tyrR, b1323

Description : aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase [Ensembl]. PAS domain, Helix-turn-helix domain, Sigma-54 interaction domain [Interproscan].

Gene families : OG_02_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAC74405
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AAL20600	STM1683, tyrR	transcriptional regulator of aromatic amino acid...	0.08	OrthoFinder
AAL21262	STM2361	putative regulatory protein [Ensembl]. PAS fold,...	0.03	OrthoFinder
AGT22853	N559_1079	sigma-54 dependent transcriptional regulator [Ensembl]....	0.04	OrthoFinder
AGT22959	N559_1193	anaerobic nitric oxide reductase transcription regulator...	0.03	OrthoFinder
AKI50171	L2625_02335	sigma-54 dependent transcriptional regulator [Ensembl]....	0.03	OrthoFinder
CCL19713	BN171_3410005	Putative sigma-54 interacting protein (fragment)...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
MF	GO:0008134	transcription factor binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003725	double-stranded RNA binding	IEP	Enrichment
MF	GO:0004180	carboxypeptidase activity	IEP	Enrichment
MF	GO:0004181	metallocarboxypeptidase activity	IEP	Enrichment
MF	GO:0004518	nuclease activity	IEP	Enrichment
MF	GO:0004857	enzyme inhibitor activity	IEP	Enrichment
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Enrichment
CC	GO:0005615	extracellular space	IEP	Enrichment
CC	GO:0005667	transcription regulator complex	IEP	Enrichment
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Enrichment
MF	GO:0008235	metalloexopeptidase activity	IEP	Enrichment
MF	GO:0008408	3'-5' exonuclease activity	IEP	Enrichment
BP	GO:0008614	pyridoxine metabolic process	IEP	Enrichment
BP	GO:0008615	pyridoxine biosynthetic process	IEP	Enrichment
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Enrichment
CC	GO:0017053	transcription repressor complex	IEP	Enrichment
MF	GO:0030414	peptidase inhibitor activity	IEP	Enrichment
MF	GO:0033856	pyridoxine 5'-phosphate synthase activity	IEP	Enrichment
BP	GO:0042816	vitamin B6 metabolic process	IEP	Enrichment
BP	GO:0042819	vitamin B6 biosynthetic process	IEP	Enrichment
MF	GO:0061134	peptidase regulator activity	IEP	Enrichment
MF	GO:0061135	endopeptidase regulator activity	IEP	Enrichment
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Enrichment
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Enrichment
CC	GO:0110001	toxin-antitoxin complex	IEP	Enrichment
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR030828	HTH_TypR	458	507
IPR002078	Sigma_54_int	207	365
IPR000014	PAS	82	134

External Links

UniProtKB	P07604

AAC74405 (tyrR, b1323)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation