Coexpression cluster: Cluster_6 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0040011 locomotion 17.54% (10/57) 5.63 0.0 0.0
GO:0097588 archaeal or bacterial-type flagellum-dependent cell motility 14.04% (8/57) 5.63 0.0 0.0
GO:0071973 bacterial-type flagellum-dependent cell motility 14.04% (8/57) 5.63 0.0 0.0
GO:0048870 cell motility 14.04% (8/57) 5.63 0.0 0.0
GO:0006928 movement of cell or subcellular component 14.04% (8/57) 5.63 0.0 0.0
GO:0001539 cilium or flagellum-dependent cell motility 14.04% (8/57) 5.63 0.0 0.0
GO:0045184 establishment of protein localization 7.02% (4/57) 3.72 0.000174 0.002737
GO:0033036 macromolecule localization 7.02% (4/57) 3.72 0.000174 0.002737
GO:0015031 protein transport 7.02% (4/57) 3.72 0.000174 0.002737
GO:0008104 protein localization 7.02% (4/57) 3.72 0.000174 0.002737
GO:0042330 taxis 3.51% (2/57) 5.63 0.000402 0.004212
GO:0042995 cell projection 3.51% (2/57) 5.63 0.000402 0.004212
GO:0003774 motor activity 3.51% (2/57) 5.63 0.000402 0.004212
GO:0009288 bacterial-type flagellum 3.51% (2/57) 5.63 0.000402 0.004212
GO:0006935 chemotaxis 3.51% (2/57) 5.63 0.000402 0.004212
GO:0007165 signal transduction 8.77% (5/57) 2.86 0.000505 0.004952
GO:0071705 nitrogen compound transport 7.02% (4/57) 3.17 0.00084 0.007761
GO:0009987 cellular process 38.6% (22/57) 0.93 0.001002 0.008736
GO:0140352 export from cell 3.51% (2/57) 4.31 0.003869 0.020945
GO:0071692 protein localization to extracellular region 3.51% (2/57) 4.31 0.003869 0.020945
GO:0046903 secretion 3.51% (2/57) 4.31 0.003869 0.020945
GO:0035592 establishment of protein localization to extracellular region 3.51% (2/57) 4.31 0.003869 0.020945
GO:0032940 secretion by cell 3.51% (2/57) 4.31 0.003869 0.020945
GO:0009306 protein secretion 3.51% (2/57) 4.31 0.003869 0.020945
GO:0006886 intracellular protein transport 3.51% (2/57) 4.31 0.003869 0.020945
GO:0051649 establishment of localization in cell 3.51% (2/57) 4.31 0.003869 0.020945
GO:0051641 cellular localization 3.51% (2/57) 4.31 0.003869 0.020945
GO:0006605 protein targeting 3.51% (2/57) 4.31 0.003869 0.020945
GO:0046907 intracellular transport 3.51% (2/57) 4.31 0.003869 0.020945
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_2 0.046 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_4 0.048 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_5 0.037 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_9 0.028 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_4 0.071 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_20 0.056 OrthoFinder Compare
Escherichia coli HCCA Cluster_12 0.03 OrthoFinder Compare
Escherichia coli HCCA Cluster_34 0.103 OrthoFinder Compare
Escherichia coli HCCA Cluster_37 0.031 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_13 0.03 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_11 0.044 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_38 0.051 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_48 0.08 OrthoFinder Compare
Salmonella enterica HCCA Cluster_14 0.146 OrthoFinder Compare
Salmonella enterica HCCA Cluster_18 0.035 OrthoFinder Compare
Salmonella enterica HCCA Cluster_39 0.106 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_1 0.073 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_19 0.037 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_6 0.031 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_11 0.036 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_22 0.03 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_28 0.047 OrthoFinder Compare
Sequences (57) (download table)

InterPro Domains

GO Terms

Family Terms