Coexpression cluster: Cluster_2 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009228 thiamine biosynthetic process 3.85% (2/52) 6.45 0.000128 0.003773
GO:0042723 thiamine-containing compound metabolic process 3.85% (2/52) 6.45 0.000128 0.003773
GO:0042724 thiamine-containing compound biosynthetic process 3.85% (2/52) 6.45 0.000128 0.003773
GO:0006772 thiamine metabolic process 3.85% (2/52) 6.45 0.000128 0.003773
GO:0016887 ATPase 11.54% (6/52) 2.59 0.000411 0.009706
GO:0051540 metal cluster binding 7.69% (4/52) 2.9 0.001877 0.031635
GO:0051536 iron-sulfur cluster binding 7.69% (4/52) 2.9 0.001877 0.031635
GO:0044272 sulfur compound biosynthetic process 3.85% (2/52) 4.65 0.002589 0.038191
GO:0072528 pyrimidine-containing compound biosynthetic process 3.85% (2/52) 4.45 0.003427 0.044933
GO:0072527 pyrimidine-containing compound metabolic process 3.85% (2/52) 4.28 0.004374 0.046923
GO:0043168 anion binding 17.31% (9/52) 1.44 0.00493 0.048474
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_2 0.034 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_3 0.033 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_14 0.079 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_15 0.033 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_25 0.032 OrthoFinder Compare
Escherichia coli HCCA Cluster_2 0.069 OrthoFinder Compare
Escherichia coli HCCA Cluster_11 0.113 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_12 0.042 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_9 0.034 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_11 0.063 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_16 0.03 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_17 0.037 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_25 0.076 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_35 0.047 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_38 0.043 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_12 0.047 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_19 0.044 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_1 0.037 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_31 0.06 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_47 0.04 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_52 0.035 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_11 0.033 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_3 0.028 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_8 0.044 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_12 0.04 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_18 0.029 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_2 0.16 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_3 0.032 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_5 0.044 OrthoFinder Compare
Sequences (52) (download table)

InterPro Domains

GO Terms

Family Terms