Coexpression cluster: Cluster_47 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003824 catalytic activity 37.24% (54/145) 0.89 1e-06 0.000395
GO:0004812 aminoacyl-tRNA ligase activity 4.14% (6/145) 3.49 1.1e-05 0.000525
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.14% (6/145) 3.49 1.1e-05 0.000525
GO:0140101 catalytic activity, acting on a tRNA 4.83% (7/145) 3.17 9e-06 0.000648
GO:0043039 tRNA aminoacylation 4.14% (6/145) 3.55 8e-06 0.000702
GO:0043038 amino acid activation 4.14% (6/145) 3.55 8e-06 0.000702
GO:0006418 tRNA aminoacylation for protein translation 4.14% (6/145) 3.68 5e-06 0.000783
GO:0003674 molecular_function 53.1% (77/145) 0.52 4.7e-05 0.002033
GO:0016874 ligase activity 5.52% (8/145) 2.49 7.7e-05 0.002954
GO:0006399 tRNA metabolic process 4.14% (6/145) 2.94 0.000105 0.003622
GO:0140098 catalytic activity, acting on RNA 4.83% (7/145) 2.54 0.000173 0.004993
GO:0043167 ion binding 17.24% (25/145) 1.11 0.000169 0.005331
GO:0006082 organic acid metabolic process 6.9% (10/145) 1.98 0.000207 0.005505
GO:0043168 anion binding 14.48% (21/145) 1.19 0.000299 0.007392
GO:0036094 small molecule binding 15.17% (22/145) 1.13 0.000356 0.008216
GO:0034660 ncRNA metabolic process 4.14% (6/145) 2.55 0.000494 0.008995
GO:0017076 purine nucleotide binding 11.03% (16/145) 1.36 0.000457 0.009311
GO:0097367 carbohydrate derivative binding 11.72% (17/145) 1.3 0.000487 0.009356
GO:0032555 purine ribonucleotide binding 11.03% (16/145) 1.36 0.00044 0.009508
GO:0019752 carboxylic acid metabolic process 6.21% (9/145) 1.92 0.000589 0.009706
GO:0043436 oxoacid metabolic process 6.21% (9/145) 1.92 0.000589 0.009706
GO:0044281 small molecule metabolic process 8.28% (12/145) 1.54 0.000808 0.0127
GO:0000166 nucleotide binding 13.1% (19/145) 1.13 0.000941 0.013018
GO:1901265 nucleoside phosphate binding 13.1% (19/145) 1.13 0.000941 0.013018
GO:0032553 ribonucleotide binding 11.03% (16/145) 1.27 0.000902 0.013574
GO:0008237 metallopeptidase activity 2.76% (4/145) 3.1 0.001051 0.013984
GO:0005524 ATP binding 9.66% (14/145) 1.32 0.001326 0.016384
GO:0032559 adenyl ribonucleotide binding 9.66% (14/145) 1.32 0.001326 0.016384
GO:0030554 adenyl nucleotide binding 9.66% (14/145) 1.32 0.001377 0.016433
GO:0016151 nickel cation binding 1.38% (2/145) 4.9 0.001456 0.016789
GO:0006520 cellular amino acid metabolic process 4.83% (7/145) 2.03 0.001536 0.017144
GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer 1.38% (2/145) 4.49 0.002869 0.029195
GO:0035639 purine ribonucleoside triphosphate binding 9.66% (14/145) 1.21 0.002721 0.029423
GO:1901564 organonitrogen compound metabolic process 10.34% (15/145) 1.16 0.002816 0.029526
GO:0004222 metalloendopeptidase activity 2.07% (3/145) 3.27 0.003287 0.032495
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_11 0.035 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_14 0.031 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_2 0.03 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_5 0.028 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_14 0.029 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_27 0.04 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_30 0.029 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_2 0.034 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_11 0.029 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_12 0.035 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_15 0.038 OrthoFinder Compare
Escherichia coli HCCA Cluster_6 0.034 OrthoFinder Compare
Escherichia coli HCCA Cluster_7 0.056 OrthoFinder Compare
Escherichia coli HCCA Cluster_9 0.045 OrthoFinder Compare
Escherichia coli HCCA Cluster_11 0.03 OrthoFinder Compare
Escherichia coli HCCA Cluster_28 0.03 OrthoFinder Compare
Escherichia coli HCCA Cluster_37 0.074 OrthoFinder Compare
Escherichia coli HCCA Cluster_47 0.033 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_3 0.046 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_9 0.028 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_2 0.035 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_9 0.041 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_11 0.05 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_22 0.036 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_23 0.032 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_24 0.028 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_29 0.048 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_26 0.031 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_28 0.029 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_8 0.031 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_5 0.031 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_7 0.032 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_12 0.055 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_17 0.029 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_6 0.041 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_10 0.037 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_14 0.036 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_19 0.035 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_27 0.036 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_31 0.029 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_33 0.03 OrthoFinder Compare
Salmonella enterica HCCA Cluster_2 0.04 OrthoFinder Compare
Salmonella enterica HCCA Cluster_6 0.038 OrthoFinder Compare
Salmonella enterica HCCA Cluster_10 0.033 OrthoFinder Compare
Salmonella enterica HCCA Cluster_30 0.031 OrthoFinder Compare
Salmonella enterica HCCA Cluster_35 0.031 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_11 0.034 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_22 0.029 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_25 0.027 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_1 0.027 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_3 0.03 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_8 0.03 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_4 0.027 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_7 0.033 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_1 0.033 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_2 0.031 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_10 0.05 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_16 0.048 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_22 0.028 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_25 0.035 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_29 0.033 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_32 0.028 OrthoFinder Compare
Sequences (145) (download table)

InterPro Domains

GO Terms

Family Terms