Aliases : CJ8421_06100
Description : two-component regulator [Ensembl]. Transcriptional regulatory protein, Response regulator receiver domain [Interproscan].
Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AHY40427 | |
Cluster | HCCA: Cluster_6 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC76061 | qseB, b3025 | quorum sensing DNA-binding response regulator in... | 0.01 | OrthoFinder | |
AAL00695 | spr1893, phoP | Response regulator [Ensembl]. Transcriptional regulatory... | 0.03 | OrthoFinder | |
AAL21035 | STM2131, baeR | response regulator in two-component regulatory system... | 0.03 | OrthoFinder | |
AAL22364 | STM3502, ompR | response regulator in two-component regulatory system... | 0.02 | OrthoFinder | |
AGT23469 | N559_1728, BaeR | DNA-binding transcriptional regulator BaeR [Ensembl].... | 0.02 | OrthoFinder | |
AKI50613 | kdpE, L2625_02823 | DNA-binding response regulator [Ensembl]. Signal... | 0.03 | OrthoFinder | |
CBI67093 | HPB8_1536 | two-component system, OmpR family, response regulator... | 0.03 | OrthoFinder | |
CCL18215 | BN171_2170002 | Two-component response regulator [Ensembl]. Response... | 0.03 | OrthoFinder | |
CCL20618 | BN171_750002 | Two-component response regulator [Ensembl]. Response... | 0.03 | OrthoFinder | |
CCP43225 | regX3, Rv0491 | Two component sensory transduction protein RegX3... | 0.04 | OrthoFinder | |
CPC66177 | yvcP, ERS093114_00991 | Two-component response regulator YvcP [Ensembl].... | 0.03 | OrthoFinder | |
CPC70217 | vicR, ERS093114_01104 | Two-component response regulator [Ensembl].... | 0.01 | OrthoFinder | |
CRO19997 | qseB_2 | Transcriptional regulatory protein QseB [Ensembl].... | 0.04 | OrthoFinder | |
CRO52494 | czcR_1 | Transcriptional activator protein CzcR [Ensembl].... | 0.01 | OrthoFinder | |
CRP18948 | ompR_3 | Transcriptional regulatory protein OmpR [Ensembl].... | 0.03 | OrthoFinder | |
CRP27775 | kdpE | KDP operon transcriptional regulatory protein KdpE... | 0.02 | OrthoFinder | |
CRP43486 | qseB_3 | Transcriptional regulatory protein QseB [Ensembl].... | 0.02 | OrthoFinder | |
CRP45027 | ompR_4 | Transcriptional regulatory protein OmpR [Ensembl].... | 0.02 | OrthoFinder | |
CRP58313 | czcR_4 | Transcriptional activator protein CzcR [Ensembl].... | 0.01 | OrthoFinder | |
KNA54887 | VCV51_031804 | response regulator receiver domain-containing protein... | 0.04 | OrthoFinder | |
KNA55120 | VCV51_031823 | response regulator receiver domain-containing protein... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000160 | phosphorelay signal transduction system | IEA | Interproscan |
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000041 | transition metal ion transport | IEP | Enrichment |
MF | GO:0003896 | DNA primase activity | IEP | Enrichment |
MF | GO:0003951 | NAD+ kinase activity | IEP | Enrichment |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
MF | GO:0004347 | glucose-6-phosphate isomerase activity | IEP | Enrichment |
MF | GO:0004743 | pyruvate kinase activity | IEP | Enrichment |
MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | Enrichment |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
BP | GO:0006090 | pyruvate metabolic process | IEP | Enrichment |
BP | GO:0006096 | glycolytic process | IEP | Enrichment |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Enrichment |
BP | GO:0006757 | ATP generation from ADP | IEP | Enrichment |
BP | GO:0006826 | iron ion transport | IEP | Enrichment |
MF | GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity | IEP | Enrichment |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Enrichment |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Enrichment |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Enrichment |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Enrichment |
BP | GO:0009306 | protein secretion | IEP | Enrichment |
BP | GO:0009403 | toxin biosynthetic process | IEP | Enrichment |
BP | GO:0009404 | toxin metabolic process | IEP | Enrichment |
MF | GO:0015093 | ferrous iron transmembrane transporter activity | IEP | Enrichment |
MF | GO:0016740 | transferase activity | IEP | Enrichment |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
MF | GO:0019213 | deacetylase activity | IEP | Enrichment |
BP | GO:0019748 | secondary metabolic process | IEP | Enrichment |
BP | GO:0032940 | secretion by cell | IEP | Enrichment |
BP | GO:0035592 | establishment of protein localization to extracellular region | IEP | Enrichment |
BP | GO:0044550 | secondary metabolite biosynthetic process | IEP | Enrichment |
BP | GO:0046031 | ADP metabolic process | IEP | Enrichment |
BP | GO:0046903 | secretion | IEP | Enrichment |
BP | GO:0046939 | nucleotide phosphorylation | IEP | Enrichment |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
BP | GO:0071692 | protein localization to extracellular region | IEP | Enrichment |
BP | GO:0140352 | export from cell | IEP | Enrichment |
No external refs found! |