AHY39395 (CJ8421_00630)

Aliases : CJ8421_00630

Description : transcriptional regulator [Ensembl]. Dihydrouridine synthase (Dus) [Interproscan].

Gene families : OG_02_0000140 (OrthoFinder) Phylogenetic Tree(s): OG0000140_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AHY39395
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
AAC76292	dusB, b3260	tRNA-dihydrouridine synthase B [Ensembl]. Dihydrouridine...	0.03	OrthoFinder
AAL00796	spr1994	Conserved hypothetical protein [Ensembl]. Dihydrouridine...	0.03	OrthoFinder
AEA92898	dus, OG1RF_10211	tRNA-dihydrouridine synthase [Ensembl]. Dihydrouridine...	0.05	OrthoFinder
AEA95160	OG1RF_12473	dihydrouridine synthase [Ensembl]. Dihydrouridine...	0.04	OrthoFinder
AGT23419	N559_1675	tRNA-dihydrouridine synthase C [Ensembl].	0.04	OrthoFinder
AKI48195	L2625_00229	dihydrouridine synthase [Ensembl]. tRNA-dihydrouridine...	0.04	OrthoFinder
AKP15466	dusC_1, WX61_01420	tRNA-dihydrouridine synthase C [Ensembl]. Dihydrouridine...	0.05	OrthoFinder
CRO51416	dus_3	putative tRNA-dihydrouridine synthase [Ensembl]....	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	None	Extended
MF	GO:0017150	tRNA dihydrouridine synthase activity	IEA	Interproscan
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Enrichment
MF	GO:0005524	ATP binding	IEP	Enrichment
BP	GO:0006629	lipid metabolic process	IEP	Enrichment
BP	GO:0009451	RNA modification	IEP	Enrichment
MF	GO:0016740	transferase activity	IEP	Enrichment
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
MF	GO:0030554	adenyl nucleotide binding	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001269	DUS_fam	11	302

External Links

No external refs found!

AHY39395 (CJ8421_00630)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation