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EDJ90061 (CGSHi22421_09721)


Aliases : CGSHi22421_09721

Description : peptide chain release factor 3 [Ensembl]. Class II release factor RF3, Elongation factor Tu domain 2, Elongation factor Tu GTP binding domain [Interproscan].


Gene families : OG_02_0000871 (OrthoFinder) Phylogenetic Tree(s): OG0000871_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90061
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AAL23375 STM4560, prfC peptide chain release factor RF-3 [Ensembl]. Class II... 0.06 OrthoFinder
AGT26063 N559_4458 peptide chain release factor 3 [Ensembl]. Elongation... 0.04 OrthoFinder
AKI48936 prfC, L2625_01017 peptide chain release factor 3 [Ensembl]. Translation... 0.03 OrthoFinder
AKP15581 prfC, WX61_01541 Peptide chain release factor 3 [Ensembl]. Class II... 0.04 OrthoFinder
KNA57619 VCV51_030432 peptide chain release factor 3 [Ensembl]. Class II... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003883 CTP synthase activity IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Enrichment
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Enrichment
BP GO:0006308 DNA catabolic process IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
CC GO:0009318 exodeoxyribonuclease VII complex IEP Enrichment
MF GO:0015562 efflux transmembrane transporter activity IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016783 sulfurtransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0034257 nicotinamide riboside transmembrane transporter activity IEP Enrichment
BP GO:0034258 nicotinamide riboside transport IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 312 378
IPR000795 T_Tr_GTP-bd_dom 10 275
IPR032090 RF3_C 385 512
No external refs found!