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  5. EDJ90245

EDJ90245 (CGSHi22421_05137)


Aliases : CGSHi22421_05137

Description : shikimate 5-dehydrogenase [Ensembl]. Shikimate / quinate 5-dehydrogenase, Shikimate 5'-dehydrogenase C-terminal domain, Shikimate dehydrogenase substrate binding domain [Interproscan].


Gene families : OG_02_0000118 (OrthoFinder) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90245
Cluster HCCA: Cluster_10


Type GO Term Name Evidence Source
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
BP GO:0009292 genetic transfer IEP Enrichment
BP GO:0009294 DNA mediated transformation IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0019104 DNA N-glycosylase activity IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR013708 Shikimate_DH-bd_N 6 88
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 119 190
IPR041121 SDH_C 238 268
No external refs found!