EDJ90434 (CGSHi22421_02511)

Aliases : CGSHi22421_02511

Description : ribonucleotide-diphosphate reductase subunit alpha [Ensembl]. ATP cone domain, Ribonucleotide reductase [Interproscan].

Gene families : OG_02_0000241 (OrthoFinder) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EDJ90434
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
AAC75294	nrdA, b2234	ribonucleoside-diphosphate reductase 1, alpha subunit...	0.03	OrthoFinder
AAL21178	STM2277, nrdA	ribonucleoside diphosphate reductase 1, alpha subunit...	0.03	OrthoFinder
AGT23359	N559_1612	ribonucleotide-diphosphate reductase subunit alpha...	0.04	OrthoFinder
AKI50153	nrdA, L2625_02317	ribonucleoside-diphosphate reductase, alpha subunit...	0.02	OrthoFinder
AKP14176	nrdA, WX61_00087	Ribonucleoside-diphosphate reductase 1 subunit alpha...	0.03	OrthoFinder
CRP63243	nrdA	Ribonucleoside-diphosphate reductase 1 subunit alpha...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	None	Extended
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Enrichment
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Enrichment
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Enrichment
BP	GO:0006826	iron ion transport	IEP	Enrichment
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	Enrichment
MF	GO:0015232	heme transmembrane transporter activity	IEP	Enrichment
BP	GO:0015886	heme transport	IEP	Enrichment
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Enrichment
BP	GO:0017004	cytochrome complex assembly	IEP	Enrichment
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Enrichment
BP	GO:0034660	ncRNA metabolic process	IEP	Enrichment
MF	GO:0035596	methylthiotransferase activity	IEP	Enrichment
BP	GO:0043038	amino acid activation	IEP	Enrichment
BP	GO:0043039	tRNA aminoacylation	IEP	Enrichment
MF	GO:0050497	alkylthioltransferase activity	IEP	Enrichment
BP	GO:1901678	iron coordination entity transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013509	RNR_lsu_N	142	219
IPR005144	ATP-cone_dom	6	92
IPR000788	RNR_lg_C	223	731

External Links

No external refs found!

EDJ90434 (CGSHi22421_02511)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation