EDJ90434 (CGSHi22421_02511)

Aliases : CGSHi22421_02511

Description : ribonucleotide-diphosphate reductase subunit alpha [Ensembl]. ATP cone domain, Ribonucleotide reductase [Interproscan].

Gene families : OG_02_0000241 (OrthoFinder) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EDJ90434
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAC75294 nrdA, b2234 ribonucleoside-diphosphate reductase 1, alpha subunit... 0.03 OrthoFinder
AAL21178 STM2277, nrdA ribonucleoside diphosphate reductase 1, alpha subunit... 0.03 OrthoFinder
AGT23359 N559_1612 ribonucleotide-diphosphate reductase subunit alpha... 0.04 OrthoFinder
AKI50153 nrdA, L2625_02317 ribonucleoside-diphosphate reductase, alpha subunit... 0.02 OrthoFinder
AKP14176 nrdA, WX61_00087 Ribonucleoside-diphosphate reductase 1 subunit alpha... 0.03 OrthoFinder
CRP63243 nrdA Ribonucleoside-diphosphate reductase 1 subunit alpha... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
MF GO:0015232 heme transmembrane transporter activity IEP Enrichment
BP GO:0015886 heme transport IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:1901678 iron coordination entity transport IEP Enrichment
InterPro domains Description Start Stop
IPR013509 RNR_lsu_N 142 219
IPR005144 ATP-cone_dom 6 92
IPR000788 RNR_lg_C 223 731
No external refs found!