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  5. EDJ90655

EDJ90655 (CGSHi22421_04078)


Aliases : CGSHi22421_04078

Description : dipeptide transport system permease protein [Ensembl]. N-terminal TM domain of oligopeptide transport permease C, Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000041 (OrthoFinder) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90655
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73919 gsiD, b0832 glutathione ABC transporter permease [Ensembl].... 0.01 OrthoFinder
AAC74327 oppC, b1245 oligopeptide ABC transporter permease [Ensembl].... 0.02 OrthoFinder
AAC74374 sapC, b1292 antimicrobial peptide transport ABC transporter permease... 0.04 OrthoFinder
AAC74558 ddpC, b1485 D,D-dipeptide ABC transporter permease [Ensembl].... 0.01 OrthoFinder
AAC76567 dppC, b3542 dipeptide/heme ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAK99995 spr1192, appC ABC transporter membrane-spanning permease-oligopeptide... 0.03 OrthoFinder
AAL20183 STM1257 putative ABC transporter [Ensembl].... 0.02 OrthoFinder
AAL20611 STM1694, sapC ABC superfamily peptide transport protein [Ensembl].... 0.04 OrthoFinder
AEA95054 opp2C, OG1RF_12367 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AGT23970 N559_2267 oligopeptide ABC transport system permease component... 0.03 OrthoFinder
AGT24127 N559_2434 putative ABC transport system permease protein... 0.03 OrthoFinder
AGT24649 N559_2985 peptide transport permease protein [Ensembl]. N-terminal... 0.03 OrthoFinder
AGT25117 N559_3466 putative ABC transport system permease component... 0.03 OrthoFinder
AKI48109 L2625_00136 oligopeptide ABC transporter, permease protein... 0.02 OrthoFinder
AKI50192 oppC, L2625_02358 oligopeptide ABC transporter, permease protein... 0.06 OrthoFinder
CCG26342 OppC Oligopeptide transport system permease protein OppC (TC... 0.06 OrthoFinder
CPC43895 oppC_2, ERS093114_00442 Oligopeptide transport system permease protein oppC... 0.02 OrthoFinder
CPC72124 opp-3C, ERS093114_01159 oligopeptide permease%2C channel-forming protein... 0.03 OrthoFinder
CPD17831 opp-1C, ERS093114_02218 Oligopeptide transporter putative membrane permease... 0.02 OrthoFinder
CRP12184 dppC Dipeptide transport system permease protein DppC... 0.04 OrthoFinder
KNA51871 VCV51_030401 binding-protein-dependent transport system inner... 0.03 OrthoFinder
KNA52460 VCV51_030124 binding-protein-dependent transport system inner... 0.03 OrthoFinder
KNA58585 VCV51_031122 binding-protein-dependent transport system inner... 0.07 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
BP GO:0071709 membrane assembly IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 111 294
IPR025966 OppC_N 12 64
No external refs found!