EDJ90881 (CGSHi22421_03493)

Aliases : CGSHi22421_03493

Description : peptide ABC transporter ATP-binding protein [Ensembl]. ABC transporter, Oligopeptide/dipeptide transporter [Interproscan].

Gene families : OG_02_0000011 (OrthoFinder) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EDJ90881
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AAC74329	oppF, b1247	oligopeptide ABC transporter ATPase [Ensembl]. ABC...	0.02	OrthoFinder
AAC74372	sapF, b1290	antimicrobial peptide ABC transporter ATPase [Ensembl]....	0.04	OrthoFinder
AAC74373	sapD, b1291	antimicrobial peptide ABC transporter ATPase [Ensembl]....	0.03	OrthoFinder
AAC74557	ddpD, b1484	D,D-dipeptide ABC transporter ATPase [Ensembl]. ABC...	0.02	OrthoFinder
AAC75241	yejF, b2180	microcin C ABC transporter ATPase [Ensembl]. ABC...	0.03	OrthoFinder
AAC76504	nikD, b3479	nickel ABC transporter ATPase [Ensembl]. ABC transporter...	0.03	OrthoFinder
AAC76505	nikE, b3480	nickel ABC transporter ATPase [Ensembl]. ABC transporter...	0.03	OrthoFinder
AAC76565	dppF, b3540	dipeptide/heme ABC transporter ATPas [Ensembl]. ABC...	0.04	OrthoFinder
AAC76566	dppD, b3541	dipeptide/heme ABC transporter ATPas [Ensembl]. ABC...	0.03	OrthoFinder
AAL00507	spr1704, amiE	ABC transporter ATP-binding protein-oligopeptide...	0.05	OrthoFinder
AAL20613	STM1696, sapF	ABC superfamily peptide transport protein [Ensembl]. ABC...	0.02	OrthoFinder
AAL21122	STM2219, yejF	putative ATPase component of ABC-type transport system...	0.03	OrthoFinder
AAL22487	STM3626, dppF	dipeptide transport protein [Ensembl]. ABC transporter,...	0.03	OrthoFinder
AAT48129	oppD, b1246	oligopeptide ABC transporter ATPase [Ensembl]. ABC...	0.02	OrthoFinder
AEA95056	opp2F, OG1RF_12369	ABC superfamily ATP binding cassette transporter, ABC...	0.04	OrthoFinder
AEA95057	opp2D, OG1RF_12370	ABC superfamily ATP binding cassette transporter, ABC...	0.02	OrthoFinder
AGT22076	N559_0254	dipeptide transporter ATP-binding subunit [Ensembl].	0.03	OrthoFinder
AGT22077	N559_0255	dipeptide transporter ATP-binding subunit [Ensembl].	0.03	OrthoFinder
AGT23466	N559_1724	putative dipeptide ABC transport system ATP-binding...	0.03	OrthoFinder
AGT23805	N559_2087	oligopeptide transporter ATP-binding component [Ensembl].	0.03	OrthoFinder
AGT23968	N559_2265	ATP-binding protein of oligopeptide ABC transport system...	0.04	OrthoFinder
AGT23969	N559_2266	putative ABC transport system ATP-binding protein [Ensembl].	0.02	OrthoFinder
AGT24126	N559_2433	putative ATP-binding component of a transport system [Ensembl].	0.02	OrthoFinder
AGT24650	N559_2986	peptide ABC transporter ATP-binding protein [Ensembl].	0.03	OrthoFinder
AKI50190	oppF, L2625_02356	oligopeptide ABC transporter, ATP-binding protein...	0.03	OrthoFinder
AKI50191	oppD, L2625_02357	oligopeptide ABC transporter, ATP-binding protein...	0.04	OrthoFinder
CBI66817	dppF, HPB8_1260	dipeptide ABC transporter, ATP-binding protein (DppF)...	0.03	OrthoFinder
CBI66818	dppD, HPB8_1261	dipeptide ABC transporter, ATP-binding protein (DppD)...	0.04	OrthoFinder
CCG26343	OppD	Oligopeptide transport ATP-binding protein OppD (TC...	0.04	OrthoFinder
CCG26344	OppF	Oligopeptide transport ATP-binding protein OppF (TC...	0.04	OrthoFinder
CPC72162	metN2_2, ERS093114_01160	ABC transporter ATP-binding protein [Ensembl]. ABC...	0.03	OrthoFinder
CPC72201	lolD_2, ERS093114_01161	ABC transporter ATP-binding protein [Ensembl]. ABC...	0.03	OrthoFinder
CPD18123	opp-1D, ERS093114_02219	Oligopeptide transporter putative ATPase domain protein...	0.02	OrthoFinder
CRP12213	oppD	Stage 0 sporulation protein KD [Ensembl]. ABC...	0.03	OrthoFinder
CRP12239	gsiA_4	Glutathione import ATP-binding protein GsiA [Ensembl]....	0.03	OrthoFinder
KNA51869	VCV51_030399	peptide ABC transporter ATP-binding protein [Ensembl]....	0.02	OrthoFinder
KNA51870	VCV51_030400	peptide ABC transporter ATP-binding protein [Ensembl]....	0.03	OrthoFinder
KNA58583	VCV51_031124	peptide ABC transporter ATP-binding protein [Ensembl]....	0.08	OrthoFinder
KNA58584	VCV51_031123	peptide ABC transporter ATP-binding protein [Ensembl]....	0.08	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015833	peptide transport	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042886	amide transport	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Enrichment
MF	GO:0003911	DNA ligase (NAD+) activity	IEP	Enrichment
MF	GO:0004180	carboxypeptidase activity	IEP	Enrichment
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Enrichment
MF	GO:0004325	ferrochelatase activity	IEP	Enrichment
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Enrichment
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Enrichment
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Enrichment
MF	GO:0004814	arginine-tRNA ligase activity	IEP	Enrichment
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Enrichment
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0006281	DNA repair	IEP	Enrichment
BP	GO:0006399	tRNA metabolic process	IEP	Enrichment
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Enrichment
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006520	cellular amino acid metabolic process	IEP	Enrichment
BP	GO:0006541	glutamine metabolic process	IEP	Enrichment
BP	GO:0006542	glutamine biosynthetic process	IEP	Enrichment
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Enrichment
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Enrichment
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0006783	heme biosynthetic process	IEP	Enrichment
BP	GO:0006950	response to stress	IEP	Enrichment
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Enrichment
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Enrichment
MF	GO:0008238	exopeptidase activity	IEP	Enrichment
MF	GO:0008852	exodeoxyribonuclease I activity	IEP	Enrichment
CC	GO:0009379	Holliday junction helicase complex	IEP	Enrichment
BP	GO:0009987	cellular process	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Enrichment
MF	GO:0016874	ligase activity	IEP	Enrichment
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Enrichment
BP	GO:0030258	lipid modification	IEP	Enrichment
BP	GO:0030259	lipid glycosylation	IEP	Enrichment
MF	GO:0032977	membrane insertase activity	IEP	Enrichment
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Enrichment
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Enrichment
CC	GO:0033202	DNA helicase complex	IEP	Enrichment
BP	GO:0033554	cellular response to stress	IEP	Enrichment
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Enrichment
MF	GO:0034061	DNA polymerase activity	IEP	Enrichment
BP	GO:0034660	ncRNA metabolic process	IEP	Enrichment
MF	GO:0035596	methylthiotransferase activity	IEP	Enrichment
BP	GO:0042168	heme metabolic process	IEP	Enrichment
BP	GO:0043038	amino acid activation	IEP	Enrichment
BP	GO:0043039	tRNA aminoacylation	IEP	Enrichment
BP	GO:0043165	Gram-negative-bacterium-type cell outer membrane assembly	IEP	Enrichment
BP	GO:0046483	heterocycle metabolic process	IEP	Enrichment
MF	GO:0050497	alkylthioltransferase activity	IEP	Enrichment
BP	GO:0050896	response to stimulus	IEP	Enrichment
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Enrichment
BP	GO:0051716	cellular response to stimulus	IEP	Enrichment
MF	GO:0070008	serine-type exopeptidase activity	IEP	Enrichment
BP	GO:0070085	glycosylation	IEP	Enrichment
BP	GO:0071709	membrane assembly	IEP	Enrichment
BP	GO:0090304	nucleic acid metabolic process	IEP	Enrichment
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Enrichment
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Enrichment
MF	GO:0140104	molecular carrier activity	IEP	Enrichment
MF	GO:0140597	protein carrier activity	IEP	Enrichment
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	24	187
IPR013563	Oligopep_ABC_C	239	305

External Links

No external refs found!

EDJ90881 (CGSHi22421_03493)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation