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EDJ91153 (ribH, CGSHi22421_10442)


Aliases : ribH, CGSHi22421_10442

Description : riboflavin synthase subunit beta [Ensembl]. 6 [Interproscan].


Gene families : OG_02_0000794 (OrthoFinder) Phylogenetic Tree(s): OG0000794_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91153
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AAC73518 ribE, b0415 riboflavin synthase beta chain [Ensembl]. 6 [Interproscan]. 0.04 OrthoFinder
AAK98965 spr0161, ribE Riboflavin synthase beta chain [Ensembl]. 6 [Interproscan]. 0.02 OrthoFinder
AHY39639 ribH, CJ8421_01920 6,7-dimethyl-8-ribityllumazine synthase [Ensembl]. 6... 0.03 OrthoFinder
AKP15631 ribE, WX61_01593 6,7-dimethyl-8-ribityllumazine synthase [Ensembl]. 6... 0.04 OrthoFinder
CBI67180 ribH, HPB8_1623 riboflavin synthase beta chain [Ensembl]. 6 [Interproscan]. 0.03 OrthoFinder
CPD29601 ribH, ERS093114_02501 6%2C7-dimethyl-8-ribityllumazine synthase [Ensembl]. 6... 0.01 OrthoFinder
CRO23294 ribH 6,7-dimethyl-8-ribityllumazine synthase [Ensembl]. 6... 0.03 OrthoFinder
KNA52705 VCV51_033387 6,7-dimethyl-8-ribityllumazine synthase [Ensembl]. 6... 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009231 riboflavin biosynthetic process IEA Interproscan
CC GO:0009349 riboflavin synthase complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Enrichment
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
MF GO:0008829 dCTP deaminase activity IEP Enrichment
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016842 amidine-lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
CC GO:0019008 molybdopterin synthase complex IEP Enrichment
BP GO:0019692 deoxyribose phosphate metabolic process IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
BP GO:0051262 protein tetramerization IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002180 LS/RS 13 151
No external refs found!