Aliases : CGSHi22421_08083
Description : 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2 [Interproscan].
Gene families : OG_02_0000332 (OrthoFinder) Phylogenetic Tree(s): OG0000332_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: EDJ91698 | |
Cluster | HCCA: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC73280 | rpsB, b0169 | 30S ribosomal subunit protein S2 [Ensembl]. Ribosomal... | 0.09 | OrthoFinder | |
AAL00822 | spr2020, rpsB | 30S Ribosomal protein S2 [Ensembl]. Ribosomal protein S2... | 0.05 | OrthoFinder | |
AAL19180 | STM0216, rpsB | 30S ribosomal subunit protein S2 [Ensembl]. Ribosomal... | 0.12 | OrthoFinder | |
ADK87275 | rpsB, MPNE_0240 | ribosomal protein S2 [Ensembl]. Ribosomal protein S2... | 0.04 | OrthoFinder | |
AEA94520 | rpsB, OG1RF_11833 | 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... | 0.04 | OrthoFinder | |
AGT25854 | N559_4232 | 30S ribosomal protein S2 [Ensembl]. | 0.07 | OrthoFinder | |
AHY40386 | rpsB, CJ8421_05895 | 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... | 0.05 | OrthoFinder | |
AKP14987 | rpsB, WX61_00924 | 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... | 0.04 | OrthoFinder | |
CBI67239 | rpsB, HPB8_1682 | small subunit ribosomal protein S2 [Ensembl]. Ribosomal... | 0.03 | OrthoFinder | |
CCG26655 | No alias | SSU ribosomal protein S2p (SAe) [Ensembl]. Ribosomal... | 0.05 | OrthoFinder | |
CCP45692 | rpsB, Rv2890c | 30S ribosomal protein S2 RpsB [Ensembl]. Ribosomal... | 0.04 | OrthoFinder | |
CPC35319 | rpsB, ERS093114_00168 | 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... | 0.04 | OrthoFinder | |
CRO13952 | rpsB | 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... | 0.07 | OrthoFinder | |
KNA52712 | VCV51_031518 | ribosomal protein S2 [Ensembl]. Ribosomal protein S2... | 0.07 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | Enrichment |
MF | GO:0004089 | carbonate dehydratase activity | IEP | Enrichment |
MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
MF | GO:0004814 | arginine-tRNA ligase activity | IEP | Enrichment |
MF | GO:0004820 | glycine-tRNA ligase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | Enrichment |
BP | GO:0006426 | glycyl-tRNA aminoacylation | IEP | Enrichment |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
MF | GO:0008097 | 5S rRNA binding | IEP | Enrichment |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Enrichment |
MF | GO:0008915 | lipid-A-disaccharide synthase activity | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
MF | GO:0016874 | ligase activity | IEP | Enrichment |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
BP | GO:0043038 | amino acid activation | IEP | Enrichment |
BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
BP | GO:0043094 | cellular metabolic compound salvage | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
BP | GO:0043174 | nucleoside salvage | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
BP | GO:1990397 | queuosine salvage | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001865 | Ribosomal_S2 | 3 | 89 |
No external refs found! |