EDJ91792 (CGSHi22421_08553)

Aliases : CGSHi22421_08553

Description : DNA polymerase III subunit beta [Ensembl]. DNA polymerase III beta subunit [Interproscan].

Gene families : OG_02_0000509 (OrthoFinder) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EDJ91792
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AAC76724 dnaN, b3701 DNA polymerase III, beta subunit [Ensembl]. DNA... 0.03 OrthoFinder
AAK98806 spr0002, dnaN DNA biosynthesis; sliding clamp subunit, required for... 0.02 OrthoFinder
AAL22696 STM3837, dnaN DNA polymerase III, beta-subunit [Ensembl]. DNA... 0.03 OrthoFinder
CPC69628 dnaN, ERS093114_01084 DNA polymerase III beta subunit [Ensembl]. DNA... 0.03 OrthoFinder
KNA53747 VCV51_030003 DNA polymerase III [Ensembl]. DNA polymerase III beta... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
MF GO:0008408 3'-5' exonuclease activity IEA Interproscan
CC GO:0009360 DNA polymerase III complex IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0001514 selenocysteine incorporation IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Enrichment
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006451 translational readthrough IEP Enrichment
MF GO:0008927 mannonate dehydratase activity IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016842 amidine-lyase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR022635 DNA_polIII_beta_C 245 365
IPR022637 DNA_polIII_beta_cen 129 243
IPR022634 DNA_polIII_beta_N 1 119
No external refs found!