CBI65832 (pnp, HPB8_275)

Aliases : pnp, HPB8_275

Description : polyribonucleotide nucleotidyltransferase [Ensembl]. KH domain, S1 RNA binding domain, 3' exoribonuclease family [Interproscan].

Gene families : OG_02_0000552 (OrthoFinder) Phylogenetic Tree(s): OG0000552_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CBI65832
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AAK99320 spr0516, pnpA Polyribonucleotide nucleotidyltransferase [Ensembl]. KH... 0.04 OrthoFinder
AAL22154 STM3282, pnp polynucleotide phosphorylase [Ensembl]. KH domain, S1... 0.07 OrthoFinder
AGT22392 N559_0594 polynucleotide phosphorylase/polyadenylase [Ensembl]. S1... 0.03 OrthoFinder
AKI49327 pnp, L2625_01423 polyribonucleotide nucleotidyltransferase [Ensembl]. S1... 0.03 OrthoFinder
AKP15710 pnp, WX61_01675 Polyribonucleotide nucleotidyltransferase [Ensembl]. KH... 0.03 OrthoFinder
CCL17488 pnp, BN171_1520006 Polyribonucleotide nucleotidyltransferase [Ensembl]. KH... 0.06 OrthoFinder
CCP45582 gpsI, Rv2783c Bifunctional protein polyribonucleotide... 0.03 OrthoFinder
CRO21175 pnp Polyribonucleotide nucleotidyltransferase [Ensembl]. KH... 0.05 OrthoFinder
KNA57724 VCV51_030417 polyribonucleotide nucleotidyltransferase [Ensembl]. KH... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR015847 ExoRNase_PH_dom2 457 526
IPR015847 ExoRNase_PH_dom2 145 211
IPR004088 KH_dom_type_1 557 609
IPR001247 ExoRNase_PH_dom1 20 139
IPR001247 ExoRNase_PH_dom1 322 453
IPR003029 S1_domain 624 683
UniProtKB D7FCC5