CBI67006 (topA5, HPB8_1449)

Aliases : topA5, HPB8_1449

Description : DNA topoisomerase I [Ensembl]. Toprim domain, DNA topoisomerase, Topoisomerase DNA binding C4 zinc finger [Interproscan].

Gene families : OG_02_0000393 (OrthoFinder) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CBI67006
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AGT24669 N559_3006 DNA topoisomerase I [Ensembl]. Toprim domain [InterProScan]. 0.02 OrthoFinder
AKI49271 topA, L2625_01365 DNA topoisomerase I [Ensembl]. TOPRIM domain, DNA... 0.02 OrthoFinder
CCL17440 topA, BN171_1500016 DNA topoisomerase I [Ensembl]. DNA topoisomerase, Toprim... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003916 DNA topoisomerase activity IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0006265 DNA topological change IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR013498 Topo_IA_Znf 614 650
IPR013498 Topo_IA_Znf 570 606
IPR013498 Topo_IA_Znf 660 697
IPR013497 Topo_IA_cen 128 542
IPR006171 TOPRIM_domain 4 113
UniProtKB D7FFP9