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  5. AGT21899

AGT21899 (N559_0070, UhpB)


Aliases : N559_0070, UhpB

Description : sensory histidine kinase UhpB [Ensembl]. dimerisation and phosphoacceptor domain [InterProScan].


Gene families : OG_02_0000122 (OrthoFinder) Phylogenetic Tree(s): OG0000122_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT21899
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AAL00618 spr1815, hk11 Histidine kinase [Ensembl]. Histidine kinase [Interproscan]. 0.04 OrthoFinder
AAL20681 STM1766, narX sensory histidine kinase in two component regulatory... 0.02 OrthoFinder
AAL22647 STM3789, uhpB sensory histidine kinase in two-component regulatory... 0.08 OrthoFinder
AEA94899 liaS, OG1RF_12212 sensor histidine kinase [Ensembl]. Histidine kinase-... 0.03 OrthoFinder
AKI48969 L2625_01051 two-component histidine kinase, putative [Ensembl].... 0.04 OrthoFinder
AKP16189 narX, WX61_02165 Nitrate/nitrite sensor protein NarX [Ensembl]. HAMP... 0.02 OrthoFinder
CPD31238 vraS_2, ERS093114_02530 Two-component sensor protein [Ensembl]. GAF domain,... 0.05 OrthoFinder
EDJ90824 CGSHi22421_05345 sensory histidine kinase in two-component regulatory... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
BP GO:0008360 regulation of cell shape IEP Enrichment
BP GO:0008616 queuosine biosynthetic process IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Enrichment
BP GO:0009143 nucleoside triphosphate catabolic process IEP Enrichment
BP GO:0009163 nucleoside biosynthetic process IEP Enrichment
CC GO:0009360 DNA polymerase III complex IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0022604 regulation of cell morphogenesis IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042455 ribonucleoside biosynthetic process IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
BP GO:0043094 cellular metabolic compound salvage IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043174 nucleoside salvage IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0046116 queuosine metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901659 glycosyl compound biosynthetic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
BP GO:1990397 queuosine salvage IEP Enrichment
InterPro domains Description Start Stop
IPR011712 Sig_transdc_His_kin_sub3_dim/P 254 319
No external refs found!