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  5. AGT22460

AGT22460 (N559_0664)


Aliases : N559_0664

Description : putative ABC transport system ATP-binding component [Ensembl].


Gene families : OG_02_0000062 (OrthoFinder) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22460
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC74586 lsrA, b1513 autoinducer 2 import ATP-binding protein [Ensembl]. ABC... 0.15 OrthoFinder
AAC75210 mglA, b2149 methyl-galactoside ABC transporter ATPase [Ensembl]. ABC... 0.04 OrthoFinder
AAL22914 STM4074, ego putative ABC-type sugar aldose transport system... 0.08 OrthoFinder
AAT48244 ytfR, b4485 putative sugar ABC transporter ATPase [Ensembl]. ABC... 0.1 OrthoFinder
AGT26647 N559_5070 rhamnose ABC transport system ATP-binding component [Ensembl]. 0.04 OrthoFinder
CRN86529 araG Arabinose import ATP-binding protein AraG [Ensembl]. ABC... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0009268 response to pH IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
BP GO:0010447 response to acidic pH IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0043752 adenosylcobinamide kinase activity IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071214 cellular response to abiotic stimulus IEP Enrichment
BP GO:0071467 cellular response to pH IEP Enrichment
BP GO:0071468 cellular response to acidic pH IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
BP GO:0104004 cellular response to environmental stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 21 163
IPR003439 ABC_transporter-like_ATP-bd 275 423
No external refs found!