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  5. AGT22766

AGT22766 (N559_0979)


Aliases : N559_0979

Description : putative ATP-binding component of a transport system [Ensembl]. MalK OB fold domain [InterProScan].


Gene families : OG_02_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22766
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAC76475 ugpC, b3450 sn-glycerol-3-phosphate ABC transporter ATPase... 0.03 OrthoFinder
AAL21067 STM2163, yehX putative ABC-type proline/glycine betaine transport... 0.04 OrthoFinder
AEA93875 OG1RF_11188 ABC superfamily ATP binding cassette transporter, ABC... 0.05 OrthoFinder
CCG26977 No alias Multiple sugar ABC transporter, ATP-binding protein... 0.03 OrthoFinder
CCP44811 Rv2038c Probable sugar-transport ATP-binding protein ABC... 0.02 OrthoFinder
CRO93099 potA_5 Spermidine/putrescine import ATP-binding protein PotA... 0.03 OrthoFinder
CRP18414 ugpC sn-glycerol-3-phosphate import ATP-binding protein UgpC... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0004371 glycerone kinase activity IEP Enrichment
BP GO:0006063 uronic acid metabolic process IEP Enrichment
BP GO:0006064 glucuronate catabolic process IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
MF GO:0008880 glucuronate isomerase activity IEP Enrichment
MF GO:0008927 mannonate dehydratase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0010393 galacturonan metabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
BP GO:0019585 glucuronate metabolic process IEP Enrichment
BP GO:0019645 anaerobic electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0045488 pectin metabolic process IEP Enrichment
BP GO:0045490 pectin catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0047487 oligogalacturonide lyase activity IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR040582 OB_MalK 241 293
IPR003439 ABC_transporter-like_ATP-bd 21 162
No external refs found!