AGT22772 (N559_0986)

Aliases : N559_0986

Description : putative transcriptional regulator [Ensembl]. Periplasmic binding protein-like domain, LacI-type HTH domain, lacI family [InterProScan].

Gene families : OG_02_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT22772
Cluster	HCCA: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
AAL00724	spr1922, malR	Maltose operon transcriptional repressor [Ensembl]....	0.03	OrthoFinder
AAL21095	STM2191, galS	GalR/LacI family transcriptional repressor of mgl operon...	0.04	OrthoFinder
AAL21246	STM2345	putative transcriptional regulator [Ensembl]. Bacterial...	0.07	OrthoFinder
AAL21887	STM3011, galR	transcriptional repressor of galETK operon [Ensembl]....	0.09	OrthoFinder
AAL22744	STM3886, rbsR	transcriptional repressor for rbs operon (GalR/LacI...	0.06	OrthoFinder
AAL22934	STM4094, cytR	GalR/LacI family transcriptional repressor [Ensembl]....	0.05	OrthoFinder
AEA94932	OG1RF_12245	LacI family sugar-binding transcriptional regulator...	0.02	OrthoFinder
AKI48007	L2625_00032	transcriptional regulator, LacI family [Ensembl]....	0.03	OrthoFinder
AKI48687	L2625_00756	LacI family transcription regulator [Ensembl]. LacI-type...	0.04	OrthoFinder
CCG27166	No alias	Catabolite control protein A [Ensembl]. Bacterial...	0.03	OrthoFinder
CCL16946	BN171_1020013	Transcriptional regulator, LacI family [Ensembl]....	0.03	OrthoFinder
KNA60659	VCV51_032098	lacI family Bacterial regulatory protein [Ensembl]....	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Enrichment
BP	GO:0000160	phosphorelay signal transduction system	IEP	Enrichment
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Enrichment
BP	GO:0006040	amino sugar metabolic process	IEP	Enrichment
BP	GO:0006050	mannosamine metabolic process	IEP	Enrichment
BP	GO:0006051	N-acetylmannosamine metabolic process	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
MF	GO:0008080	N-acetyltransferase activity	IEP	Enrichment
BP	GO:0008643	carbohydrate transport	IEP	Enrichment
BP	GO:0009401	phosphoenolpyruvate-dependent sugar phosphotransferase system	IEP	Enrichment
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	Enrichment
MF	GO:0015556	C4-dicarboxylate transmembrane transporter activity	IEP	Enrichment
BP	GO:0015740	C4-dicarboxylate transport	IEP	Enrichment
MF	GO:0016407	acetyltransferase activity	IEP	Enrichment
MF	GO:0016410	N-acyltransferase activity	IEP	Enrichment
MF	GO:0016657	oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor	IEP	Enrichment
BP	GO:0019216	regulation of lipid metabolic process	IEP	Enrichment
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	Enrichment
MF	GO:0033739	preQ1 synthase activity	IEP	Enrichment
BP	GO:0035556	intracellular signal transduction	IEP	Enrichment
MF	GO:0047465	N-acylglucosamine-6-phosphate 2-epimerase activity	IEP	Enrichment
BP	GO:0062012	regulation of small molecule metabolic process	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment
MF	GO:0120227	acyl-CoA binding	IEP	Enrichment
MF	GO:0140110	transcription regulator activity	IEP	Enrichment
MF	GO:1901567	fatty acid derivative binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000843	HTH_LacI	1	45

External Links

No external refs found!

AGT22772 (N559_0986)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation