AGT23103 (N559_1341)

Aliases : N559_1341

Description : protein disaggregation chaperone [Ensembl]. D2-small domain, Clp amino terminal domain, AAA domain (Cdc48 subfamily), AAA lid domain, ATPase family associated with various cellular activities (AAA) [InterProScan].

Gene families : OG_02_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT23103
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
AAC75641	clpB, b2592	protein disaggregation chaperone [Ensembl]. C-terminal,...	0.23	OrthoFinder
AAK99111	spr0307, clpL	ATP-dependent protease ATP-binding subunit [Ensembl]....	0.04	OrthoFinder
AAK99529	spr0725, clpE	ATP dependent protease [Ensembl]. C-terminal, AAA lid...	0.03	OrthoFinder
AAL21550	STM2660, clpB	ATP-dependent protease [Ensembl]. C-terminal, AAA lid...	0.22	OrthoFinder
ADK87250	clpB, MPNE_0627	chaperone protein ClpB [Ensembl]. AAA lid domain, ATPase...	0.02	OrthoFinder
AEA93131	clpE, OG1RF_10444	ATP-dependent Clp protease [Ensembl]. C-terminal, AAA...	0.04	OrthoFinder
AEA94480	clpB, OG1RF_11793	chaperone protein ClpB [Ensembl]. C-terminal, AAA lid...	0.05	OrthoFinder
AHY39751	CJ8421_02500	ATP-dependent chaperone protein ClpB [Ensembl]....	0.04	OrthoFinder
AKI50204	clpB, L2625_02371	ATP-dependent Clp protease, ATP-binding subunit...	0.03	OrthoFinder
AKP15926	clpB, WX61_01896	Chaperone protein ClpB [Ensembl]. C-terminal, AAA lid...	0.06	OrthoFinder
CBI67148	clpA, HPB8_1591	ATP-dependent Clp protease ATP-binding subunit ClpA...	0.02	OrthoFinder
CCG26873	ClpE	ATP-dependent Clp protease, ATP-binding subunit ClpE...	0.03	OrthoFinder
CCG27087	No alias	putative ATP-dependent Clp proteinase (ATP-binding...	0.05	OrthoFinder
CPC44266	clpB_1, ERS093114_00454	chaperone protein ClpB [Ensembl]. C-terminal, AAA lid...	0.03	OrthoFinder
CPC57876	clpC, ERS093114_00855	endopeptidase Clp ATP-binding subunit C [Ensembl]....	0.04	OrthoFinder
CRN66395	clpB_1	Heat shock protein F84.1 [Ensembl]. C-terminal, AAA lid...	0.14	OrthoFinder
EDJ91635	CGSHi22421_07768	hypothetical protein [Ensembl]. C-terminal, AAA lid...	0.13	OrthoFinder
KNA57481	VCV51_030464, ClpB	ATP-dependent chaperone ClpB [Ensembl]. C-terminal, AAA...	0.1	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	Enrichment
MF	GO:0003684	damaged DNA binding	IEP	Enrichment
MF	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	IEP	Enrichment
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004222	metalloendopeptidase activity	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
BP	GO:0006284	base-excision repair	IEP	Enrichment
BP	GO:0006289	nucleotide-excision repair	IEP	Enrichment
BP	GO:0006457	protein folding	IEP	Enrichment
BP	GO:0006508	proteolysis	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0008237	metallopeptidase activity	IEP	Enrichment
MF	GO:0008270	zinc ion binding	IEP	Enrichment
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Enrichment
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Enrichment
MF	GO:0030234	enzyme regulator activity	IEP	Enrichment
MF	GO:0031072	heat shock protein binding	IEP	Enrichment
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Enrichment
MF	GO:0042802	identical protein binding	IEP	Enrichment
MF	GO:0042803	protein homodimerization activity	IEP	Enrichment
MF	GO:0043169	cation binding	IEP	Enrichment
MF	GO:0046872	metal ion binding	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
MF	GO:0046983	protein dimerization activity	IEP	Enrichment
MF	GO:0051082	unfolded protein binding	IEP	Enrichment
MF	GO:0051087	chaperone binding	IEP	Enrichment
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Enrichment
MF	GO:0060590	ATPase regulator activity	IEP	Enrichment
MF	GO:0098772	molecular function regulator	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR019489	Clp_ATPase_C	732	811
IPR004176	Clp_R_dom	60	111
IPR004176	Clp_R_dom	2	34
IPR003959	ATPase_AAA_core	562	726
IPR003959	ATPase_AAA_core	169	303
IPR041546	ClpA/ClpB_AAA_lid	308	408

External Links

No external refs found!

AGT23103 (N559_1341)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation