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  5. AGT23903

AGT23903 (N559_2191)


Aliases : N559_2191

Description : amino acid ABC transport system periplasmic binding component [Ensembl]. Solute-binding protein family 3/N-terminal domain of MltF [InterProScan].


Gene families : OG_02_0000028 (OrthoFinder) Phylogenetic Tree(s): OG0000028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23903
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73898 glnH, b0811 glutamine transporter subunit [Ensembl]. Bacterial... 0.04 OrthoFinder
AAC73947 artJ, b0860 arginine ABC transporter periplasmic binding protein... 0.17 OrthoFinder
AAC73950 artI, b0863 arginine transporter subunit [Ensembl]. Bacterial... 0.05 OrthoFinder
AAC74987 tcyJ, b1920 cystine transporter subunit [Ensembl]. Bacterial... 0.13 OrthoFinder
AAC75369 hisJ, b2309 histidine ABC transporter periplasmic binding protein... 0.07 OrthoFinder
AAC75370 argT, b2310 lysine/arginine/ornithine transporter subunit [Ensembl].... 0.05 OrthoFinder
AAK98905 spr0101, ABC-SBP ABC transporter solute-binding protein-amino acid... 0.05 OrthoFinder
AAL19766 STM0830, glnH glutamine high-affinity transporter [Ensembl]. Bacterial... 0.09 OrthoFinder
AAL19822 STM0887, artJ arginine 3rd transport system [Ensembl]. Bacterial... 0.06 OrthoFinder
AAL19825 STM0890, artI arginine transport system [Ensembl]. Bacterial... 0.04 OrthoFinder
AAL20866 STM1954, fliY putative periplasmic binding transport protein... 0.05 OrthoFinder
AAL21255 STM2354, hisJ histidine transport protein [Ensembl]. Bacterial... 0.08 OrthoFinder
AAL21256 STM2355, argT lysine/arginine/ornithine transport protein [Ensembl].... 0.05 OrthoFinder
AGT25391 N559_3755 ABC transporter, substrate-binding protein, family 3... 0.05 OrthoFinder
AKI49732 L2625_01873 amino acid ABC transporter, amino acid-binding protein... 0.06 OrthoFinder
AKI50283 L2625_02451 polar amino acid ABC transporter, substrate-binding... 0.12 OrthoFinder
AKP15747 WX61_01712 putative amino-acid ABC transporter-binding protein... 0.04 OrthoFinder
CCL16927 BN171_1000001 ABC-type transport system, aminoacid-family... 0.03 OrthoFinder
CCL18016 BN171_2030002 ABC-type transport system, aminoacid-family... 0.04 OrthoFinder
CCL18562 BN171_2440003 ABC-type transport system,cystine/aminoacid-family... 0.05 OrthoFinder
CCL18566 BN171_2440007 ABC-type transport system,cystine/aminoacid-family... 0.06 OrthoFinder
CRN71135 argT_1 Lysine-arginine-ornithine-binding periplasmic protein... 0.04 OrthoFinder
CRP46906 fliY_2 Sulfate starvation-induced protein 7 [Ensembl].... 0.06 OrthoFinder
CRP49296 artJ ABC transporter arginine-binding protein 1 precursor... 0.04 OrthoFinder
EDJ90649 CGSHi22421_04048 arginine transporter permease subunit ArtQ [Ensembl].... 0.04 OrthoFinder
KNA53745 VCV51_033271 bacterial extracellular solute-binding protein, family 3... 0.1 OrthoFinder
KNA58916 VCV51_031259 lysine-arginine-ornithine-binding periplasmic protein... 0.04 OrthoFinder
KNA59810 VCV51_030870 lysine-arginine-ornithine-binding periplasmic protein... 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Enrichment
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Enrichment
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006570 tyrosine metabolic process IEP Enrichment
BP GO:0006571 tyrosine biosynthetic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0046417 chorismate metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 17 236
No external refs found!