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AGT24485 (N559_2812)


Aliases : N559_2812

Description : fumarate hydratase, class II [Ensembl].


Gene families : OG_02_0000168 (OrthoFinder) Phylogenetic Tree(s): OG0000168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24485
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AAL20389 STM1469, fumC fumarase C [Ensembl]. Lyase, Fumarase C C-terminus... 0.06 OrthoFinder
AKP15941 fumC, WX61_01911 Fumarate hydratase class II [Ensembl]. Lyase, Fumarase C... 0.03 OrthoFinder
CBI65711 fumC, HPB8_154 fumarate hydratase [Ensembl]. Lyase, Fumarase C... 0.02 OrthoFinder
CBI66408 aspA, HPB8_851 aspartate ammonia-lyase (AspA) [Ensembl]. Lyase,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004555 alpha,alpha-trehalase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006274 DNA replication termination IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Enrichment
BP GO:0009245 lipid A biosynthetic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0015927 trehalase activity IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0019213 deacetylase activity IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046493 lipid A metabolic process IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1901269 lipooligosaccharide metabolic process IEP Enrichment
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR022761 Fumarate_lyase_N 22 352
IPR018951 Fumarase_C_C 418 471
No external refs found!