AGT25011 (N559_3355, RarA)


Aliases : N559_3355, RarA

Description : recombination factor protein RarA [Ensembl]. AAA C-terminal domain, ATPase family associated with various cellular activities (AAA) [InterProScan].


Gene families : OG_02_0000427 (OrthoFinder) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25011

Target Alias Description ECC score Gene Family Method Actions
AAC73978 rarA, b0892 recombination intermediate processing DNA-dependent... 0.08 OrthoFinder
AAL00419 spr1616, cshA Chromosome segregation helicase [Ensembl]. AAA... 0.02 OrthoFinder
KNA54694 VCV51_030778 ATPase [Ensembl]. AAA C-terminal domain, MgsA AAA+... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006177 GMP biosynthetic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
MF GO:0019203 carbohydrate phosphatase activity IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0031589 cell-substrate adhesion IEP Enrichment
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0043708 cell adhesion involved in biofilm formation IEP Enrichment
BP GO:0043709 cell adhesion involved in single-species biofilm formation IEP Enrichment
BP GO:0046037 GMP metabolic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
MF GO:0050308 sugar-phosphatase activity IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR021886 MgsA_C 249 415
IPR032423 AAA_assoc_2 169 248
IPR003959 ATPase_AAA_core 34 140
No external refs found!