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  5. AGT25383

AGT25383 (N559_3745)


Aliases : N559_3745

Description : putative ABC transport system periplasmic dipeptide binding component [Ensembl]. Solute-binding protein family 5 domain, family 5 Middle [InterProScan].


Gene families : OG_02_0000055 (OrthoFinder) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25383
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73917 gsiB, b0830 glutathione ABC transporter periplasmic binding protein... 0.19 OrthoFinder
AAC74376 sapA, b1294 antimicrobial peptide transport ABC transporter... 0.02 OrthoFinder
AAC74560 ddpA, b1487 D,D-dipeptide ABC transporter periplasmic binding... 0.06 OrthoFinder
AAC76569 dppA, b3544 dipeptide/heme ABC transporter periplasmic binding... 0.06 OrthoFinder
AAL19785 STM0849, yliB putative ABC transporter periplasmic binding protein... 0.08 OrthoFinder
AAL22491 STM3630, dppA dipeptide transport protein [Ensembl]. Bacterial... 0.17 OrthoFinder
AEA95053 opp2A, OG1RF_12366 peptide ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AGT23463 N559_1721 putative ABC transport system periplasmic binding... 0.03 OrthoFinder
AKI48107 L2625_00134 oligopeptide ABC transporter, oligopeptide-binding... 0.04 OrthoFinder
CCL17024 oppA, BN171_1090005 ABC-type transport system, oligopeptide-family... 0.04 OrthoFinder
CCL19134 appA, BN171_2880001 ABC-type transport system, oligopeptide-family... 0.06 OrthoFinder
CRP11968 dppA_2 Dipeptide-binding protein [Ensembl]. Bacterial... 0.06 OrthoFinder
CRP11994 dppA_3 Dipeptide-binding protein [Ensembl]. Bacterial... 0.01 OrthoFinder
CRP12075 dppA_4 Dipeptide-binding protein [Ensembl]. Bacterial... 0.04 OrthoFinder
CRP12127 dppA_5 Dipeptide-binding protein [Ensembl]. Bacterial... 0.03 OrthoFinder
EDJ90884 CGSHi22421_03508 ABC-type transport system, periplasmic component,... 0.03 OrthoFinder
EDJ91435 CGSHi22421_05008 heme-binding lipoprotein [Ensembl]. Bacterial... 0.03 OrthoFinder
KNA51873 VCV51_030403 bacterial extracellular solute-binding protein, family 5... 0.04 OrthoFinder
KNA52458 VCV51_030122 bacterial extracellular solute-binding protein, family 5... 0.05 OrthoFinder
KNA58587 VCV51_031120 bacterial extracellular solute-binding protein, family 5... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000914 SBP_5_dom 70 437
No external refs found!